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‎.buildinfo

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# Sphinx build info version 1
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# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
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config: 2ae660fac1b496ecfa094a4bc99fe869
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config: be01d068c91dd2b1da30dc62b5c598cf
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tags: 645f666f9bcd5a90fca523b33c5a78b7

‎_sources/index.rst.txt

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.. card::
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Upcoming scikit-bio `workshop at ISMB 2024 <https://www.iscb.org/ismb2024/programme-schedule/tutorials#ip3>`_, July 11, Montreal, Canada. Welcome to join!
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Upcoming scikit-bio `workshop at ISMB 2024 <https://www.iscb.org/ismb2024/programme-schedule/tutorials#ip3>`_, July 12, Montreal, Canada. Welcome to join!
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.. card::
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‎_sphinx_design_static/design-tabs.js

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var sd_labels_by_text = {};
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// @ts-check
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// Extra JS capability for selected tabs to be synced
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// The selection is stored in local storage so that it persists across page loads.
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/**
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* @type {Record<string, HTMLElement[]>}
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*/
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let sd_id_to_elements = {};
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const storageKeyPrefix = "sphinx-design-tab-id-";
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/**
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* Create a key for a tab element.
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* @param {HTMLElement} el - The tab element.
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* @returns {[string, string, string] | null} - The key.
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*
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*/
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function create_key(el) {
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let syncId = el.getAttribute("data-sync-id");
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let syncGroup = el.getAttribute("data-sync-group");
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if (!syncId || !syncGroup) return null;
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return [syncGroup, syncId, syncGroup + "--" + syncId];
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}
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/**
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* Initialize the tab selection.
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*
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*/
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function ready() {
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const li = document.getElementsByClassName("sd-tab-label");
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for (const label of li) {
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syncId = label.getAttribute("data-sync-id");
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if (syncId) {
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label.onclick = onLabelClick;
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if (!sd_labels_by_text[syncId]) {
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sd_labels_by_text[syncId] = [];
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// Find all tabs with sync data
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/** @type {string[]} */
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let groups = [];
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document.querySelectorAll(".sd-tab-label").forEach((label) => {
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if (label instanceof HTMLElement) {
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let data = create_key(label);
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if (data) {
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let [group, id, key] = data;
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// add click event listener
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// @ts-ignore
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label.onclick = onSDLabelClick;
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// store map of key to elements
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if (!sd_id_to_elements[key]) {
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sd_id_to_elements[key] = [];
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}
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sd_id_to_elements[key].push(label);
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if (groups.indexOf(group) === -1) {
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groups.push(group);
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// Check if a specific tab has been selected via URL parameter
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const tabParam = new URLSearchParams(window.location.search).get(
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group
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);
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if (tabParam) {
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console.log(
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"sphinx-design: Selecting tab id for group '" +
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group +
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"' from URL parameter: " +
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tabParam
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);
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window.sessionStorage.setItem(storageKeyPrefix + group, tabParam);
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}
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}
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// Check is a specific tab has been selected previously
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let previousId = window.sessionStorage.getItem(
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storageKeyPrefix + group
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);
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if (previousId === id) {
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// console.log(
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// "sphinx-design: Selecting tab from session storage: " + id
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// );
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// @ts-ignore
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label.previousElementSibling.checked = true;
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}
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}
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sd_labels_by_text[syncId].push(label);
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}
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}
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});
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}
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function onLabelClick() {
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// Activate other inputs with the same sync id.
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syncId = this.getAttribute("data-sync-id");
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for (label of sd_labels_by_text[syncId]) {
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/**
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* Activate other tabs with the same sync id.
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*
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* @this {HTMLElement} - The element that was clicked.
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*/
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function onSDLabelClick() {
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let data = create_key(this);
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if (!data) return;
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let [group, id, key] = data;
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for (const label of sd_id_to_elements[key]) {
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if (label === this) continue;
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// @ts-ignore
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label.previousElementSibling.checked = true;
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}
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window.localStorage.setItem("sphinx-design-last-tab", syncId);
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window.sessionStorage.setItem(storageKeyPrefix + group, id);
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}
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document.addEventListener("DOMContentLoaded", ready, false);

‎_sphinx_design_static/design-style.1e8bd061cd6da7fc9cf755528e8ffc24.min.css renamed to ‎_sphinx_design_static/sphinx-design.min.css

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‎_static/basic.css

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*
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* Sphinx stylesheet -- basic theme.
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*
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* :copyright: Copyright 2007-2023 by the Sphinx team, see AUTHORS.
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* :copyright: Copyright 2007-2024 by the Sphinx team, see AUTHORS.
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* :license: BSD, see LICENSE for details.
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*
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*/

‎_static/design-tabs.js

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var sd_labels_by_text = {};
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// @ts-check
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// Extra JS capability for selected tabs to be synced
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// The selection is stored in local storage so that it persists across page loads.
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/**
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* @type {Record<string, HTMLElement[]>}
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*/
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let sd_id_to_elements = {};
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const storageKeyPrefix = "sphinx-design-tab-id-";
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/**
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* Create a key for a tab element.
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* @param {HTMLElement} el - The tab element.
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* @returns {[string, string, string] | null} - The key.
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*
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*/
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function create_key(el) {
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let syncId = el.getAttribute("data-sync-id");
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let syncGroup = el.getAttribute("data-sync-group");
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if (!syncId || !syncGroup) return null;
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return [syncGroup, syncId, syncGroup + "--" + syncId];
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}
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/**
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* Initialize the tab selection.
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*
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*/
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function ready() {
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const li = document.getElementsByClassName("sd-tab-label");
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for (const label of li) {
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syncId = label.getAttribute("data-sync-id");
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if (syncId) {
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label.onclick = onLabelClick;
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if (!sd_labels_by_text[syncId]) {
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sd_labels_by_text[syncId] = [];
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// Find all tabs with sync data
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/** @type {string[]} */
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let groups = [];
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document.querySelectorAll(".sd-tab-label").forEach((label) => {
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if (label instanceof HTMLElement) {
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let data = create_key(label);
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if (data) {
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let [group, id, key] = data;
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// add click event listener
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// @ts-ignore
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label.onclick = onSDLabelClick;
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// store map of key to elements
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if (!sd_id_to_elements[key]) {
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sd_id_to_elements[key] = [];
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}
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sd_id_to_elements[key].push(label);
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if (groups.indexOf(group) === -1) {
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groups.push(group);
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// Check if a specific tab has been selected via URL parameter
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const tabParam = new URLSearchParams(window.location.search).get(
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group
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);
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if (tabParam) {
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console.log(
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"sphinx-design: Selecting tab id for group '" +
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group +
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"' from URL parameter: " +
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tabParam
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);
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window.sessionStorage.setItem(storageKeyPrefix + group, tabParam);
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}
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}
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// Check is a specific tab has been selected previously
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let previousId = window.sessionStorage.getItem(
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storageKeyPrefix + group
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);
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if (previousId === id) {
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// console.log(
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// "sphinx-design: Selecting tab from session storage: " + id
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// );
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// @ts-ignore
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label.previousElementSibling.checked = true;
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}
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}
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sd_labels_by_text[syncId].push(label);
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}
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}
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});
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}
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function onLabelClick() {
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// Activate other inputs with the same sync id.
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syncId = this.getAttribute("data-sync-id");
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for (label of sd_labels_by_text[syncId]) {
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/**
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* Activate other tabs with the same sync id.
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*
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* @this {HTMLElement} - The element that was clicked.
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*/
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function onSDLabelClick() {
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let data = create_key(this);
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if (!data) return;
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let [group, id, key] = data;
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for (const label of sd_id_to_elements[key]) {
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if (label === this) continue;
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// @ts-ignore
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label.previousElementSibling.checked = true;
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}
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window.localStorage.setItem("sphinx-design-last-tab", syncId);
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window.sessionStorage.setItem(storageKeyPrefix + group, id);
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}
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document.addEventListener("DOMContentLoaded", ready, false);

‎_static/doctools.js

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*
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* Base JavaScript utilities for all Sphinx HTML documentation.
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*
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* :copyright: Copyright 2007-2023 by the Sphinx team, see AUTHORS.
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* :copyright: Copyright 2007-2024 by the Sphinx team, see AUTHORS.
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* :license: BSD, see LICENSE for details.
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*
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*/

‎_static/language_data.js

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* This script contains the language-specific data used by searchtools.js,
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* namely the list of stopwords, stemmer, scorer and splitter.
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*
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* :copyright: Copyright 2007-2023 by the Sphinx team, see AUTHORS.
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* :copyright: Copyright 2007-2024 by the Sphinx team, see AUTHORS.
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* :license: BSD, see LICENSE for details.
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*
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*/
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var stopwords = ["a", "and", "are", "as", "at", "be", "but", "by", "for", "if", "in", "into", "is", "it", "near", "no", "not", "of", "on", "or", "such", "that", "the", "their", "then", "there", "these", "they", "this", "to", "was", "will", "with"];
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/* Non-minified version is copied as a separate JS file, is available */
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/* Non-minified version is copied as a separate JS file, if available */
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/**
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* Porter Stemmer

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