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Hoist warning message from fill_from_parsed_config into helper function
Now that we're keeping track of all the unstable options we don't need
to emmit the warning when ``config.fill_from_parsed_config`` is called.
This also has the added benefit of removing a side-effect from calling
``config.fill_from_parsed_config``, and instead the entire warning
string is returned from a pure helper function, which made testing the
warning message easier.
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