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Description
Hello!
When I followed the README.md of test_case "minimal", the following error occurred, which was due to an error in the config.yaml file. Adding "iqtree-unpartitioned" fixed the error. Perhaps this can be adjusted so that a problem-free test run is possible.
./phylociraptor mltree --verbose -t local=1
2025-[...] Welcome to phylociraptor mltree v1.0.0
2025-[...] - No config file specified, will use default: data/config.yaml
2025-[...] - Singularity version: 3.8.7
2025-[...] - Snakemake version: 7.32.4
2025-[...] - Local job execution specified (local=1)
2025-[...] - ERROR: KeyError in file [...]/mltree.smk, line 291:
It would also be good if the documentation pointed out that it is better to follow the README.md file and not the tutorial provided online, as this was no longer reproducible, at least in my case.
Thank you,
Vera