Very large java stack traces generated in rabix composer logs

[zymergen-mbarton]

I always see these very large stack traces in the rabix composer output logs.
Is there a way to fix this? About 50% of my coworkers whom use rabix composer
see this, while the others don't.

WARNING: The following warnings have been detected: WARNING: HK2 service reification failed for [org.glassfish.jersey.message.internal.DataSourceProvider] with an exception:
MultiException stack 1 of 2
java.lang.NoClassDefFoundError: javax/activation/DataSource
    at java.base/java.lang.Class.getDeclaredConstructors0(Native Method)
    at java.base/java.lang.Class.privateGetDeclaredConstructors(Class.java:3110)
    at java.base/java.lang.Class.getDeclaredConstructors(Class.java:2314)
    at org.jvnet.hk2.internal.Utilities$3.run(Utilities.java:1311)
    at org.jvnet.hk2.internal.Utilities$3.run(Utilities.java:1307)
    at java.base/java.security.AccessController.doPrivileged(Native Method)
    at org.jvnet.hk2.internal.Utilities.getAllConstructors(Utilities.java:1307)
    at org.jvnet.hk2.internal.Utilities.findProducerConstructor(Utilities.java:1250)
    at org.jvnet.hk2.internal.DefaultClassAnalyzer.getConstructor(DefaultClassAnalyzer.java:82)
    at org.glassfish.jersey.internal.inject.JerseyClassAnalyzer.getConstructor(JerseyClassAnalyzer.java:144)
    at org.jvnet.hk2.internal.Utilities.getConstructor(Utilities.java:179)
    at org.jvnet.hk2.internal.ClazzCreator.initialize(ClazzCreator.java:129)
    at org.jvnet.hk2.internal.ClazzCreator.initialize(ClazzCreator.java:182)
    at org.jvnet.hk2.internal.SystemDescriptor.internalReify(SystemDescriptor.java:722)
    at org.jvnet.hk2.internal.SystemDescriptor.reify(SystemDescriptor.java:677)
    at org.jvnet.hk2.internal.ServiceLocatorImpl.reifyDescriptor(ServiceLocatorImpl.java:459)
    at org.jvnet.hk2.internal.ServiceLocatorImpl.narrow(ServiceLocatorImpl.java:2181)
    at org.jvnet.hk2.internal.ServiceLocatorImpl.access$1200(ServiceLocatorImpl.java:121)
    at org.jvnet.hk2.internal.ServiceLocatorImpl$9.compute(ServiceLocatorImpl.java:1325)
    at org.jvnet.hk2.internal.ServiceLocatorImpl$9.compute(ServiceLocatorImpl.java:1320)
    at org.glassfish.hk2.utilities.cache.LRUHybridCache$OriginThreadAwareFuture$1.call(LRUHybridCache.java:115)
    at org.glassfish.hk2.utilities.cache.LRUHybridCache$OriginThreadAwareFuture$1.call(LRUHybridCache.java:111)
    at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
    at org.glassfish.hk2.utilities.cache.LRUHybridCache$OriginThreadAwareFuture.run(LRUHybridCache.java:173)
    at org.glassfish.hk2.utilities.cache.LRUHybridCache.compute(LRUHybridCache.java:292)
    at org.jvnet.hk2.internal.ServiceLocatorImpl.internalGetAllServiceHandles(ServiceLocatorImpl.java:1382)
    at org.jvnet.hk2.internal.ServiceLocatorImpl.getAllServiceHandles(ServiceLocatorImpl.java:1307)
    at org.jvnet.hk2.internal.ServiceLocatorImpl.getAllServiceHandles(ServiceLocatorImpl.java:1296)
    at org.glassfish.jersey.internal.inject.Providers.getServiceHandles(Providers.java:354)
    at org.glassfish.jersey.internal.inject.Providers.getCustomProviders(Providers.java:201)
    at org.glassfish.jersey.message.internal.MessageBodyFactory.<init>(MessageBodyFactory.java:221)
    at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
    at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
    at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
    at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
    at org.glassfish.hk2.utilities.reflection.ReflectionHelper.makeMe(ReflectionHelper.java:1129)
    at org.jvnet.hk2.internal.ClazzCreator.createMe(ClazzCreator.java:274)
    at org.jvnet.hk2.internal.ClazzCreator.create(ClazzCreator.java:368)
    at org.jvnet.hk2.internal.SystemDescriptor.create(SystemDescriptor.java:470)
    at org.jvnet.hk2.internal.SingletonContext$1.compute(SingletonContext.java:82)
    at org.jvnet.hk2.internal.SingletonContext$1.compute(SingletonContext.java:70)
    at org.glassfish.hk2.utilities.cache.Cache$OriginThreadAwareFuture$1.call(Cache.java:97)
    at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
    at org.glassfish.hk2.utilities.cache.Cache$OriginThreadAwareFuture.run(Cache.java:154)
    at org.glassfish.hk2.utilities.cache.Cache.compute(Cache.java:199)
    at org.jvnet.hk2.internal.SingletonContext.findOrCreate(SingletonContext.java:121)
    at org.jvnet.hk2.internal.Utilities.createService(Utilities.java:2065)
    at org.jvnet.hk2.internal.ServiceLocatorImpl.internalGetService(ServiceLocatorImpl.java:761)
    at org.jvnet.hk2.internal.ServiceLocatorImpl.getUnqualifiedService(ServiceLocatorImpl.java:768)
    at org.jvnet.hk2.internal.IterableProviderImpl.get(IterableProviderImpl.java:110)
    at org.glassfish.jersey.client.RequestProcessingInitializationStage.apply(RequestProcessingInitializationStage.java:97)
    at org.glassfish.jersey.client.RequestProcessingInitializationStage.apply(RequestProcessingInitializationStage.java:67)
    at org.glassfish.jersey.process.internal.Stages$LinkedStage.apply(Stages.java:308)
    at org.glassfish.jersey.process.internal.Stages.process(Stages.java:171)
    at org.glassfish.jersey.client.ClientRuntime$2.run(ClientRuntime.java:156)
    at org.glassfish.jersey.internal.Errors$1.call(Errors.java:271)
    at org.glassfish.jersey.internal.Errors$1.call(Errors.java:267)
    at org.glassfish.jersey.internal.Errors.process(Errors.java:315)
    at org.glassfish.jersey.internal.Errors.process(Errors.java:297)
    at org.glassfish.jersey.internal.Errors.process(Errors.java:267)
    at org.glassfish.jersey.process.internal.RequestScope.runInScope(RequestScope.java:340)
    at org.glassfish.jersey.client.ClientRuntime$3.run(ClientRuntime.java:209)
    at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:514)
    at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
    at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
    at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
    at java.base/java.lang.Thread.run(Thread.java:844)
Caused by: java.lang.ClassNotFoundException: javax.activation.DataSource
    at java.base/jdk.internal.loader.BuiltinClassLoader.loadClass(BuiltinClassLoader.java:582)
    at java.base/jdk.internal.loader.ClassLoaders$AppClassLoader.loadClass(ClassLoaders.java:185)
    at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:496)
    ... 67 more
MultiException stack 2 of 2
java.lang.IllegalArgumentException: Errors were discovered while reifying SystemDescriptor(
    implementation=org.glassfish.jersey.message.internal.DataSourceProvider
    contracts={javax.ws.rs.ext.MessageBodyReader,javax.ws.rs.ext.MessageBodyWriter}
    scope=javax.inject.Singleton
    qualifiers={}
    descriptorType=CLASS
    descriptorVisibility=NORMAL
    metadata=
    rank=0
    loader=org.glassfish.hk2.utilities.binding.AbstractBinder$2@16cd6a6b
    proxiable=null
    proxyForSameScope=null
    analysisName=null
    id=12
    locatorId=1
    identityHashCode=2047823520
    reified=false)
    at org.jvnet.hk2.internal.SystemDescriptor.reify(SystemDescriptor.java:688)
    at org.jvnet.hk2.internal.ServiceLocatorImpl.reifyDescriptor(ServiceLocatorImpl.java:459)
    at org.jvnet.hk2.internal.ServiceLocatorImpl.narrow(ServiceLocatorImpl.java:2181)
    at org.jvnet.hk2.internal.ServiceLocatorImpl.access$1200(ServiceLocatorImpl.java:121)
    at org.jvnet.hk2.internal.ServiceLocatorImpl$9.compute(ServiceLocatorImpl.java:1325)
    at org.jvnet.hk2.internal.ServiceLocatorImpl$9.compute(ServiceLocatorImpl.java:1320)
    at org.glassfish.hk2.utilities.cache.LRUHybridCache$OriginThreadAwareFuture$1.call(LRUHybridCache.java:115)
    at org.glassfish.hk2.utilities.cache.LRUHybridCache$OriginThreadAwareFuture$1.call(LRUHybridCache.java:111)
    at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
    at org.glassfish.hk2.utilities.cache.LRUHybridCache$OriginThreadAwareFuture.run(LRUHybridCache.java:173)
    at org.glassfish.hk2.utilities.cache.LRUHybridCache.compute(LRUHybridCache.java:292)
    at org.jvnet.hk2.internal.ServiceLocatorImpl.internalGetAllServiceHandles(ServiceLocatorImpl.java:1382)
    at org.jvnet.hk2.internal.ServiceLocatorImpl.getAllServiceHandles(ServiceLocatorImpl.java:1307)
    at org.jvnet.hk2.internal.ServiceLocatorImpl.getAllServiceHandles(ServiceLocatorImpl.java:1296)
    at org.glassfish.jersey.internal.inject.Providers.getServiceHandles(Providers.java:354)
    at org.glassfish.jersey.internal.inject.Providers.getCustomProviders(Providers.java:201)
    at org.glassfish.jersey.message.internal.MessageBodyFactory.<init>(MessageBodyFactory.java:221)
    at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
    at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
    at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
    at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:488)
    at org.glassfish.hk2.utilities.reflection.ReflectionHelper.makeMe(ReflectionHelper.java:1129)
    at org.jvnet.hk2.internal.ClazzCreator.createMe(ClazzCreator.java:274)
    at org.jvnet.hk2.internal.ClazzCreator.create(ClazzCreator.java:368)
    at org.jvnet.hk2.internal.SystemDescriptor.create(SystemDescriptor.java:470)
    at org.jvnet.hk2.internal.SingletonContext$1.compute(SingletonContext.java:82)
    at org.jvnet.hk2.internal.SingletonContext$1.compute(SingletonContext.java:70)
    at org.glassfish.hk2.utilities.cache.Cache$OriginThreadAwareFuture$1.call(Cache.java:97)
    at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
    at org.glassfish.hk2.utilities.cache.Cache$OriginThreadAwareFuture.run(Cache.java:154)
    at org.glassfish.hk2.utilities.cache.Cache.compute(Cache.java:199)
    at org.jvnet.hk2.internal.SingletonContext.findOrCreate(SingletonContext.java:121)
    at org.jvnet.hk2.internal.Utilities.createService(Utilities.java:2065)
    at org.jvnet.hk2.internal.ServiceLocatorImpl.internalGetService(ServiceLocatorImpl.java:761)
    at org.jvnet.hk2.internal.ServiceLocatorImpl.getUnqualifiedService(ServiceLocatorImpl.java:768)
    at org.jvnet.hk2.internal.IterableProviderImpl.get(IterableProviderImpl.java:110)
    at org.glassfish.jersey.client.RequestProcessingInitializationStage.apply(RequestProcessingInitializationStage.java:97)
    at org.glassfish.jersey.client.RequestProcessingInitializationStage.apply(RequestProcessingInitializationStage.java:67)
    at org.glassfish.jersey.process.internal.Stages$LinkedStage.apply(Stages.java:308)
    at org.glassfish.jersey.process.internal.Stages.process(Stages.java:171)
    at org.glassfish.jersey.client.ClientRuntime$2.run(ClientRuntime.java:156)
    at org.glassfish.jersey.internal.Errors$1.call(Errors.java:271)
    at org.glassfish.jersey.internal.Errors$1.call(Errors.java:267)
    at org.glassfish.jersey.internal.Errors.process(Errors.java:315)
    at org.glassfish.jersey.internal.Errors.process(Errors.java:297)
    at org.glassfish.jersey.internal.Errors.process(Errors.java:267)
    at org.glassfish.jersey.process.internal.RequestScope.runInScope(RequestScope.java:340)
    at org.glassfish.jersey.client.ClientRuntime$3.run(ClientRuntime.java:209)
    at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:514)
    at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
    at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1167)
    at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:641)
    at java.base/java.lang.Thread.run(Thread.java:844)

Thanks for reporting this. Are there any salient differences in the two groups of users? OS, OS build, java version? I'll move this to the Rabix Executor (Bunny repo)

[zymergen-mbarton]

WARNING: An illegal reflective access operation has occurred
WARNING: Illegal reflective access by com.google.inject.internal.cglib.core.$ReflectUtils$1 (file:/Applications/rabix-composer.app/Contents/Resources/app.asar.unpacked/executor/lib/rabix-cli.jar) to method java.lang.ClassLoader.defineClass(java.lang.String,byte[],int,int,java.security.ProtectionDomain)
WARNING: Please consider reporting this to the maintainers of com.google.inject.internal.cglib.core.$ReflectUtils$1
WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
WARNING: All illegal access operations will be denied in a future release

We also see these errors too.