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Description
This is problematic as this was a feature of bioptim to find tracked markers and display them automatically in the animation.
Error message:
Traceback (most recent call last): File "/home/puchaud/Projets_Python/Pyomeca_github/bioviz/bioviz/__init__.py", line 881, in __animate_from_slider self.__set_experimental_markers_from_frame() File "/home/puchaud/Projets_Python/Pyomeca_github/bioviz/bioviz/__init__.py", line 1130, in __set_experimental_markers_from_frame self.vtk_model.update_experimental_markers( File "/home/puchaud/Projets_Python/Pyomeca_github/bioviz/bioviz/biorbd_vtk.py", line 481, in update_experimental_markers self._update_experimental_marker_link(virtual_to_experimental_markers_indices) File "/home/puchaud/Projets_Python/Pyomeca_github/bioviz/bioviz/biorbd_vtk.py", line 564, in _update_experimental_marker_link self._new_experimental_marker_link(virtual_to_experimental_markers_indices) File "/home/puchaud/Projets_Python/Pyomeca_github/bioviz/bioviz/biorbd_vtk.py", line 528, in _new_experimental_marker_link points.InsertNextPoint(self.markers["experimental"].data[:3, i, 0].data) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^ File "/home/puchaud/miniconda3/envs/bio23/lib/python3.11/site-packages/xarray/core/dataarray.py", line 817, in __getitem__ return self.isel(indexers=self._item_key_to_dict(key)) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/puchaud/miniconda3/envs/bio23/lib/python3.11/site-packages/xarray/core/dataarray.py", line 1402, in isel variable = self._variable.isel(indexers, missing_dims=missing_dims) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/puchaud/miniconda3/envs/bio23/lib/python3.11/site-packages/xarray/core/variable.py", line 1336, in isel return self[key] ~~~~^^^^^ File "/home/puchaud/miniconda3/envs/bio23/lib/python3.11/site-packages/xarray/core/variable.py", line 880, in __getitem__ data = as_indexable(self._data)[indexer] ~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^ File "/home/puchaud/miniconda3/envs/bio23/lib/python3.11/site-packages/xarray/core/indexing.py", line 1330, in __getitem__ return array[key] ~~~~~^^^^^ IndexError: index 5 is out of bounds for axis 1 with size 5