Getting error in running your code

[beginner984]

Hello

I am pursuing your tutorial but I get this error

> fcs_1 <- fsApply(fcs_raw1, function(x, cofactor = 5){
+   
+   colnames(x) <- panel_fcs_raw1$desc
+   
+   expr <- exprs(x)
+   
+   expr <- asinh(expr[, c(panel_fcs_raw1$desc)] / cofactor)
+   
+   exprs(x) <- expr
+   
+   x
+   
+ })
Error in expr[, c(panel_fcs_raw1$desc)] : subscript out of bounds

Please can you help me with this?

[gcIL20]

Bump. I'm having the exact same problem, but only with my own data. Any ideas what this issue could be?

[shanh1]

Same issue here!

[shanh1]

Fixed for anyone who is interested. My "Time" row had NA in desc. Had to change to character vector.

I used the following code:

panel_fcs_raw1$desc<-replace(panel_fcs_raw1$desc, is.na(panel_fcs_raw1$desc), "NA")