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    18 repositories

    • domain-annotation-pipeline

      Public
      Data pipeline to provide consensus domain annotations for protein structures
      Python
      •
      GNU General Public License v3.0
      •0•2•1•4•Updated Aug 14, 2025Aug 14, 2025

    • ted-web

      Public
      TED: Automated Domain Parsing of AlphaFold DB
      TypeScript
      •
      MIT License
      •2•6•4•2•Updated Aug 12, 2025Aug 12, 2025

    • cath-alphaflow

      Public
      Python
      •
      GNU Lesser General Public License v2.1
      •3•22•19•1•Updated May 19, 2025May 19, 2025

    • cath-ted-check-hmm-matches

      Public
      Check HMM / TED domain boundaries
      Jupyter Notebook
      •0•1•0•0•Updated Jul 24, 2024Jul 24, 2024

    • eMMA

      Public
      Functional Families generation using embedding distance matrices
      Perl
      •
      GNU General Public License v3.0
      •0•0•1•0•Updated Jun 10, 2024Jun 10, 2024

    • eMMA-FunFHMMER

      Public
      distance-source agnostic FunFHMMER
      Perl
      •1•2•0•0•Updated Mar 27, 2024Mar 27, 2024

    • cath-tools

      Public
      Protein structure comparison tools such as SSAP and SNAP
      bioinformaticsbiologypdbstructureproteinalignmentssaporengosuperpositionucl
      C++
      •
      GNU General Public License v3.0
      •14•64•25•0•Updated Nov 10, 2023Nov 10, 2023

    • cath-api-docs

      Public
      CATH API documentation
      2•10•3•0•Updated Dec 20, 2022Dec 20, 2022

    • cath-vamsi-check-xhits

      Public
      Checking for crosshits in CATH sequence datasets
      0•0•0•0•Updated May 4, 2021May 4, 2021

    • cath-hello-world

      Public
      Testing GitHub flow
      Apache License 2.0
      •0•0•0•0•Updated Apr 13, 2021Apr 13, 2021

    • cath-tools-supplementary

      Public
      Supplementary materials for cath-tools
      HTML
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Mar 12, 2021Mar 12, 2021

    • cath-tools-genomescan

      Public
      CATH: high-throughput protein structure/function annotations
      Perl
      •
      GNU General Public License v3.0
      •5•10•6•0•Updated Dec 17, 2019Dec 17, 2019

    • cath-pseudoenzymes

      Public
      Identifying pseudoenzymes from CATH Functional Families (FunFams)
      HTML
      •
      MIT License
      •0•0•0•0•Updated Jun 19, 2019Jun 19, 2019

    • cath-todo

      Public
      Issues relating to the CATH protein structure classification web pages
      Python
      •0•4•35•0•Updated Mar 13, 2019Mar 13, 2019

    • genome3d-openapi-client

      Public
      Tool to interact with the Genome3D API
      Perl
      •
      GNU General Public License v3.0
      •1•5•3•0•Updated Nov 20, 2018Nov 20, 2018

    • cath-tools-seqscan

      Public
      CATH: scan/align protein sequences against functional families
      Perl
      •0•3•1•0•Updated Oct 10, 2018Oct 10, 2018

    • cath-funfam-docs

      Public
      CATH Functional Families (FunFam)
      0•7•1•0•Updated Jul 22, 2017Jul 22, 2017

    • secmake

      Public
      Tool to create .sec files that describe SS elements of protein structures
      0•1•0•0•Updated Jun 29, 2016Jun 29, 2016