vtk bottle installs libs of wrong version? #6327

themightyoarfish · 2025-08-07T10:47:03Z

themightyoarfish
Aug 7, 2025

Output of `brew config`

HOMEBREW_VERSION: 4.6.0
ORIGIN: https://github.com/Homebrew/brew
HEAD: a7ea27a9c81660931a9796edc63d8533dfb1da26
Last commit: 2 days ago
Branch: stable
Core tap JSON: 07 Aug 10:38 UTC
Core cask tap JSON: 07 Aug 10:38 UTC
HOMEBREW_PREFIX: /opt/homebrew
HOMEBREW_CASK_OPTS: []
HOMEBREW_EDITOR: nvim
HOMEBREW_MAKE_JOBS: 10
HOMEBREW_NO_AUTO_UPDATE: set
HOMEBREW_VERBOSE: set
Homebrew Ruby: 3.4.5 => /opt/homebrew/Library/Homebrew/vendor/portable-ruby/3.4.5/bin/ruby
CPU: deca-core 64-bit arm_firestorm_icestorm
Clang: 16.0.0 build 1600
Git: 2.38.1 => /opt/homebrew/bin/git
Curl: 8.7.1 => /usr/bin/curl
macOS: 15.5-arm64
CLT: 16.3.0.0.1.1742442376
Xcode: 16.0
Rosetta 2: false

Output of `brew doctor`

Please note that these warnings are just used to help the Homebrew maintainers
with debugging if you file an issue. If everything you use Homebrew for is
working fine: please don't worry or file an issue; just ignore this. Thanks!

Warning: Some installed casks are deprecated or disabled.
You should find replacements for the following casks:
  darktable
==> Cask Environment Variables:
BUNDLE_PATH
CHRUBY_VERSION
GEM_HOME
GEM_PATH
HOMEBREW_CASK_OPTS
LC_ALL
PATH
RBENV_VERSION
RUBYLIB
RUBYOPT
RUBYPATH
SHELL
==> $LOAD_PATHS
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/bundler-2.6.8/lib
/opt/homebrew/Library/Homebrew/vendor/portable-ruby/3.4.5/lib/ruby/gems/3.4.0/gems/msgpack-1.8.0/lib
/opt/homebrew/Library/Homebrew/vendor/portable-ruby/3.4.5/lib/ruby/gems/3.4.0/gems/debug-1.11.0/lib
/opt/homebrew/Library/Homebrew/vendor/portable-ruby/3.4.5/lib/ruby/gems/3.4.0/gems/bootsnap-1.18.6/lib
/opt/homebrew/Library/Homebrew/vendor/portable-ruby/3.4.5/lib/ruby/gems/3.4.0/extensions/arm64-darwin-20/3.4.0-static/msgpack-1.8.0
/opt/homebrew/Library/Homebrew/vendor/portable-ruby/3.4.5/lib/ruby/gems/3.4.0/extensions/arm64-darwin-20/3.4.0-static/debug-1.11.0
/opt/homebrew/Library/Homebrew/vendor/portable-ruby/3.4.5/lib/ruby/gems/3.4.0/extensions/arm64-darwin-20/3.4.0-static/bootsnap-1.18.6
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/warning-1.5.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/vernier-1.8.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/extensions/arm64-darwin-20/3.4.0-static/vernier-1.8.0
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/tapioca-0.17.7/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/yard-sorbet-0.9.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/yard-0.9.37/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/stackprof-0.2.27/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/extensions/arm64-darwin-20/3.4.0-static/stackprof-0.2.27
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/spoom-1.7.5/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/thor-1.4.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/sorbet-static-and-runtime-0.5.12357/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/sorbet-0.5.12357/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/sorbet-static-0.5.12357-universal-darwin/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/simplecov-cobertura-2.1.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/simplecov-0.22.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/simplecov_json_formatter-0.1.4/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/simplecov-html-0.13.2/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/ruby-prof-1.7.2/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/extensions/arm64-darwin-20/3.4.0-static/ruby-prof-1.7.2
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/ruby-macho-4.1.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/ruby-lsp-0.25.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/rubocop-sorbet-0.10.5/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/rubocop-rspec-3.6.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/rubocop-performance-1.25.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/rubocop-md-2.0.1/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/rubocop-1.78.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/unicode-display_width-3.1.4/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/unicode-emoji-4.0.4/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/ruby-progressbar-1.13.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/rubocop-ast-1.46.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/rspec_junit_formatter-0.6.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/rspec-sorbet-1.9.2/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/sorbet-runtime-0.5.12357/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/rspec-retry-0.6.2/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/rspec-github-3.0.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/rspec-3.13.1/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/rspec-mocks-3.13.5/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/rspec-expectations-3.13.5/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/rspec-core-3.13.5/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/rspec-support-3.13.4/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/require-hooks-0.2.2/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/redcarpet-3.6.1/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/extensions/arm64-darwin-20/3.4.0-static/redcarpet-3.6.1
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/rbi-0.3.6/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/rbs-4.0.0.dev.4/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/extensions/arm64-darwin-20/3.4.0-static/rbs-4.0.0.dev.4
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/rainbow-3.1.1/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/pycall-1.5.2/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/extensions/arm64-darwin-20/3.4.0-static/pycall-1.5.2
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/pry-0.15.2/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/prism-1.4.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/extensions/arm64-darwin-20/3.4.0-static/prism-1.4.0
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/plist-3.7.2/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/patchelf-1.5.1/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/parser-3.3.9.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/racc-1.8.1/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/extensions/arm64-darwin-20/3.4.0-static/racc-1.8.1
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/parallel_tests-5.3.1/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/parallel-1.27.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/netrc-0.11.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/minitest-5.25.5/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/method_source-1.1.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/logger-1.7.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/lint_roller-1.1.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/language_server-protocol-3.17.0.5/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/kramdown-2.5.1/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/rexml-3.4.1/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/json_schemer-2.4.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/simpleidn-0.2.3/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/regexp_parser-2.10.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/json-2.13.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/extensions/arm64-darwin-20/3.4.0-static/json-2.13.0
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/hana-1.3.7/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/erubi-1.13.1/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/elftools-1.3.1/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/docile-1.4.1/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/diff-lcs-1.6.2/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/csv-3.3.5/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/concurrent-ruby-1.3.5/lib/concurrent-ruby
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/coderay-1.1.3/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/bindata-2.5.1/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/bigdecimal-3.2.2/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/extensions/arm64-darwin-20/3.4.0-static/bigdecimal-3.2.2
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/benchmark-0.4.1/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/base64-0.3.0/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/ast-2.4.3/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/addressable-2.8.7/lib
/opt/homebrew/Library/Homebrew/vendor/bundle/ruby/3.4.0/gems/public_suffix-6.0.2/lib
/opt/homebrew/Library/Homebrew
/opt/homebrew/Library/Homebrew/vendor/portable-ruby/3.4.5/lib/ruby/vendor_ruby/3.4.0
/opt/homebrew/Library/Homebrew/vendor/portable-ruby/3.4.5/lib/ruby/vendor_ruby/3.4.0/arm64-darwin20
/opt/homebrew/Library/Homebrew/vendor/portable-ruby/3.4.5/lib/ruby/vendor_ruby
/opt/homebrew/Library/Homebrew/vendor/portable-ruby/3.4.5/lib/ruby/3.4.0
/opt/homebrew/Library/Homebrew/vendor/portable-ruby/3.4.5/lib/ruby/3.4.0/arm64-darwin20
==> Homebrew Version
4.6.0
==> macOS
15.5
==> SIP
Enabled
==> Homebrew Cask Staging Location
/opt/homebrew/Caskroom
==> Homebrew Cask Taps:
/opt/homebrew/Library/Taps/grishka/homebrew-grishka (1 cask)
/opt/homebrew/Library/Taps/homebrew/homebrew-cask (7545 casks)

Warning: A newer Command Line Tools release is available.
Update them from Software Update in System Settings.

If that doesn't show you any updates, run:
  sudo rm -rf /Library/Developer/CommandLineTools
  sudo xcode-select --install

Alternatively, manually download them from:
  https://developer.apple.com/download/all/.
You should download the Command Line Tools for Xcode 16.4.


This is a Tier 2 configuration:
  https://docs.brew.sh/Support-Tiers#tier-2
You can report Tier 2 unrelated issues to Homebrew/* repositories!
Read the above document instead before opening any issues or PRs.


Warning: Some installed formulae are deprecated or disabled.
You should find replacements for the following formulae:
  icu4c@76
  libassuan@2
  openssl@1.1
  tldr

Warning: You have the following deprecated, official taps tapped:
  Homebrew/homebrew-services
Untap them with `brew untap`.

Warning: You have unlinked kegs in your Cellar.
Leaving kegs unlinked can lead to build-trouble and cause formulae that depend on
those kegs to fail to run properly once built. Run `brew link` on these:
  aws-c-compression
  aws-c-event-stream
  zeromq
  gcc
  numpy
  protobuf
  poco

Warning: Your Xcode (16.0) is outdated.
Please update to Xcode 16.4 (or delete it).
Xcode can be updated from the App Store.


This is a Tier 2 configuration:
  https://docs.brew.sh/Support-Tiers#tier-2
You can report Tier 2 unrelated issues to Homebrew/* repositories!
Read the above document instead before opening any issues or PRs.


Warning: Some installed formulae are missing dependencies.
You should `brew install` the missing dependencies:
  brew install krb5

Run `brew missing` for more details.

Description of issue

The current vtk version on brew is 9.4.2. When I install this, there are some libraries from 9.4.1, such as /opt/homebrew/lib/libvtkGUISupportQt-9.4.1.dylib. Is this correct? I am hunting a segmentation fault and stumbled upon this.

Answered by themightyoarfish

Aug 7, 2025

it seems like this happens with a source install too, so maybe its an upstream (or non-) issue.

View full answer

themightyoarfish · 2025-08-07T13:18:29Z

themightyoarfish
Aug 7, 2025
Author

it seems like this happens with a source install too, so maybe its an upstream (or non-) issue.

1 reply

carlocab Aug 10, 2025
Collaborator

If it happens with a source install, then it's definitely an upstream issue. Best to report this to them.

Provide feedback

Saved searches

Use saved searches to filter your results more quickly

Homebrew

vtk bottle installs libs of wrong version? #6327

Uh oh!

{{title}}

Uh oh!

Replies: 1 comment 1 reply

Uh oh!

{{title}}

Uh oh!

Uh oh!

{{title}}

Uh oh!

Select a reply

Uh oh!

Homebrew

vtk bottle installs libs of wrong version? #6327

Uh oh!

themightyoarfish Aug 7, 2025

Output of brew config

Output of brew doctor

Description of issue

Replies: 1 comment · 1 reply

Uh oh!

themightyoarfish Aug 7, 2025 Author

Uh oh!

carlocab Aug 10, 2025 Collaborator

themightyoarfish
Aug 7, 2025

Output of `brew config`

Output of `brew doctor`

Replies: 1 comment 1 reply

themightyoarfish
Aug 7, 2025
Author

carlocab Aug 10, 2025
Collaborator