Repositories list

• hla-curation-interface

  Public
  The HLA Curation Interface (HCI) is a tool designed to facilitate the curation of information about HLA alleles and haplotypes.

  medicinegeneticsbiology

  Python

  •

  MIT License

  •0•0•9•0•Updated Aug 21, 2025Aug 21, 2025

• stanford-affils

  Public
  Stanford ClinGen's affiliations service

  Python

  •

  MIT License

  •1•0•13•2•Updated Aug 19, 2025Aug 19, 2025

• vci-v4

  Public
  Variant Curation Interface v4

  TypeScript

  •

  MIT License

  •0•0•0•0•Updated Aug 11, 2025Aug 11, 2025

• VCI-transformation

  Public
  Scripts for transforming VCI JSON-LD into DMWG Interpretation JSON-LD

  Python

  •1•0•0•1•Updated Jun 12, 2025Jun 12, 2025

• stanford-hci

  Public
  Stanford ClinGen's HLA curation interface

  Python

  •0•0•8•0•Updated May 1, 2025May 1, 2025

• stanford-dev-docs

  Public
  Stanford ClinGen's central developer documentation repository

  Python

  •0•0•0•0•Updated Apr 26, 2025Apr 26, 2025

• vci-v4-gks

  Public
  The variant curation interface (VCI) version 4's Genomic Knowledge Standards (GKS) implementation

  Python

  •

  Apache License 2.0

  •1•0•0•0•Updated Oct 11, 2024Oct 11, 2024

• interpretation_json

  Public
  Python library for creating JSON documents conforming to the DMWG interpretation model.

  Python

  •

  Eclipse Public License 1.0

  •1•0•0•0•Updated May 23, 2023May 23, 2023

• gene-and-variant-curation-tools

  Public
  ClinGen's gene and variant curation interfaces (GCI & VCI). Developed by Stanford ClinGen team.

  JavaScript

  •

  MIT License

  •1•3•148•60•Updated Mar 6, 2023Mar 6, 2023

• clincoded

  Public
  This GCI/VCI 1.0 platform has now been retired, and replaced with our new 2.0 platform:

  JavaScript

  •

  MIT License

  •9•25•1•13•Updated Sep 16, 2022Sep 16, 2022

• test-pub

  Public
  JavaScript

  •0•0•0•0•Updated Sep 20, 2021Sep 20, 2021

• python_react_programming_starter

  Public
  Cherry Lab Python Programming test; based on Flask/Elasticsearch

  JavaScript

  •

  MIT License

  •6•0•0•0•Updated Nov 20, 2019Nov 20, 2019

• react_programming_starter

  Public
  An example react application used by SGD.

  JavaScript

  •

  MIT License

  •6•0•0•0•Updated Nov 10, 2018Nov 10, 2018

• clincoded-ui-dev

  Public
  Temporary UI development workbench

  JavaScript

  •1•1•0•0•Updated Jan 22, 2018Jan 22, 2018

• ildb

  Public
  Individual Level Database

  CSS

  •

  MIT License

  •0•0•0•0•Updated Sep 20, 2017Sep 20, 2017

• pyencoded-tools

  Public
  Python

  •

  MIT License

  •13•0•0•0•Updated Jun 8, 2017Jun 8, 2017

• snovault

  Public
  The SnoVault general purpose hybrid object-relational database

  Python

  •

  MIT License

  •8•0•0•0•Updated Mar 17, 2017Mar 17, 2017

• variant-server

  Public
  A simple web-based service to return JSON objects describing known and predicted effects of genetic variants

  Shell

  •

  GNU General Public License v3.0

  •1•2•0•0•Updated Dec 15, 2016Dec 15, 2016

• predict-var

  Public
  Variant Predictions

  0•0•0•0•Updated Jul 1, 2016Jul 1, 2016

• clingen

  Public
  ClinGen website ProcessWire template

  PHP

  •1•0•0•0•Updated Feb 8, 2016Feb 8, 2016

• LoadData

  Public
  Python scripts to load pre-curation data into local mongodb

  Python

  •0•0•0•0•Updated Jan 29, 2016Jan 29, 2016

• load-data-node

  Public
  A version of LoadData written in node.

  JavaScript

  •0•0•0•0•Updated Jun 4, 2015Jun 4, 2015

• Spindle

  Public
  HTML

  •0•0•0•0•Updated May 26, 2015May 26, 2015

• Spindle-1

  Public
  Gene Curation - ClinGen

  JavaScript

  •0•0•0•0•Updated May 6, 2015May 6, 2015

• clinvar-demo

  Public
  Demonstration of using the genboree.com REST API

  PHP

  •0•2•0•0•Updated Jul 25, 2014Jul 25, 2014

• svgtest

  Public
  Demonstration of hovering over elements of an SVG

  CSS

  •0•0•0•0•Updated Jun 23, 2014Jun 23, 2014