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@BIC-MNI McConnell Brain Imaging Centre, Montreal Neurological Institute, McGill University

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    56 repositories

    • BIC_MRI_pipeline_util

      Public
      Python
      •0•0•0•0•Updated Aug 18, 2025Aug 18, 2025

    • MNI_7T_DICOM_to_BIDS

      Public
      Python
      •1•1•4•1•Updated Aug 18, 2025Aug 18, 2025

    • minc-toolkit-v2

      Public
      Version 2 of the minc-toolkit, uses tools based on ITK version 4.x
      CMake
      •
      GNU General Public License v3.0
      •21•53•42•0•Updated May 27, 2025May 27, 2025

    • postf

      Public
      postf minc visualisation tool
      C
      •
      Other
      •1•1•0•0•Updated May 8, 2025May 8, 2025

    • Display

      Public
      MNI Display project, converted from CVS
      C
      •
      Other
      •5•8•44•0•Updated May 8, 2025May 8, 2025

    • xdisp

      Public
      xdisp is an image display tool for X window systems
      C
      •
      GNU General Public License v2.0
      •1•2•2•0•Updated May 6, 2025May 6, 2025

    • EZminc

      Public
      MRI image processing toolkit, main io library is now integrated into main MINC distribution at https://github.com/BIC-MNI/minc
      C++
      •6•6•1•0•Updated May 6, 2025May 6, 2025

    • EBTKS

      Public
      MINC EBTKS library
      C++
      •
      Other
      •6•2•1•1•Updated May 6, 2025May 6, 2025

    • build_packages

      Public
      Automatically build minc-toolkit&Co packages using Docker
      Dockerfile
      •2•3•1•0•Updated May 6, 2025May 6, 2025

    • bicgl

      Public
      BIC Graphics library, used in Display, register, and ray_trace.
      C
      •
      Other
      •1•1•1•0•Updated Apr 11, 2025Apr 11, 2025

    • libminc

      Public
      libminc is the core library and API of the MINC toolkit
      C
      •
      Other
      •30•19•21•1•Updated Feb 24, 2025Feb 24, 2025

    • bicpl

      Public
      BICPL: The Brain Imaging Centre Programming Library
      C
      •
      Other
      •10•3•1•1•Updated Nov 28, 2024Nov 28, 2024

    • glim_image

      Public
      glim_image minc tool
      C
      •
      Other
      •0•1•0•0•Updated Nov 28, 2024Nov 28, 2024

    • minc-tools

      Public
      Basic minc-tools from former minc repository
      C
      •
      Other
      •25•32•44•2•Updated Nov 28, 2024Nov 28, 2024

    • mni_autoreg

      Public
      MINC mni_autoreg
      C
      •
      Other
      •9•8•10•0•Updated Nov 25, 2024Nov 25, 2024

    • oobicpl

      Public
      oobicpl MINC tool
      C++
      •
      Other
      •3•1•1•0•Updated Nov 25, 2024Nov 25, 2024

    • mni-perllib

      Public
      MNI MINC perllib (not used much anymore)
      Perl
      •6•2•1•0•Updated Nov 25, 2024Nov 25, 2024

    • conglomerate

      Public
      MINC conglomerate imported from cvs repository
      C
      •
      Other
      •3•4•0•1•Updated Nov 25, 2024Nov 25, 2024

    • Register

      Public
      MNI Register, visualization and registration software for images.
      C
      •
      Other
      •3•3•13•0•Updated Oct 1, 2024Oct 1, 2024

    • pyezminc

      Public
      Python interface to MINC , using cython and EZminc library
      Python
      •
      GNU General Public License v2.0
      •6•6•1•0•Updated Jul 5, 2024Jul 5, 2024

    • arguments

      Public
      MINC arguments library
      C++
      •2•1•1•0•Updated Jul 2, 2024Jul 2, 2024

    • minc-toolkit

      Public
      Metaproject uniting all the available minc tools
      CMake
      •
      GNU General Public License v3.0
      •15•39•23•1•Updated Aug 9, 2023Aug 9, 2023

    • mrisim

      Public
      MRI Simulator
      C++
      •
      Other
      •1•3•0•0•Updated Jan 19, 2023Jan 19, 2023

    • minc_gco

      Public
      minc wrapper around graph-cut algorithm
      C++
      •0•0•0•0•Updated Jan 19, 2023Jan 19, 2023

    • inormalize

      Public
      inormalize MINC tool
      C++
      •
      Other
      •3•1•1•1•Updated Jan 19, 2023Jan 19, 2023

    • N3

      Public
      MINC N3
      C++
      •
      Other
      •5•6•5•2•Updated Jan 19, 2023Jan 19, 2023

    • classify

      Public
      MINC classify
      C++
      •
      Other
      •2•2•2•0•Updated Dec 13, 2022Dec 13, 2022

    • ray_trace

      Public
      ray_trace MINC tool
      C
      •
      Other
      •3•1•1•0•Updated Oct 8, 2021Oct 8, 2021

    • BEaST

      Public
      C implementation of Brain Extraction based on nonlocal Segmentation Technique
      C
      •
      GNU General Public License v3.0
      •10•16•2•0•Updated Aug 20, 2021Aug 20, 2021

    • neuroimaging-training-03

      Public
      HTML
      •
      Other
      •1•0•0•2•Updated Nov 27, 2020Nov 27, 2020