Repositories list

• status

  Public
  Status Monitor for BBMRI-ERIC

  upptimebbmri

  Markdown

  •

  MIT License

  •0•1•0•0•Updated Aug 17, 2025Aug 17, 2025

• negotiator

  Public
  An Open-source access negotation system for Research Infrastructures

  researchbiobankaccess-management+ 2negotiatorbbmri

  Java

  •

  GNU Affero General Public License v3.0

  •8•24•41•11•Updated Aug 15, 2025Aug 15, 2025

• directory-negotiator-sync

  Public
  Microservice to synchronize ressources from the BBMRI-ERIC Directory into the BBMRI-ERIC Negotiator.

  Python

  •

  GNU Affero General Public License v3.0

  •0•1•1•0•Updated Aug 13, 2025Aug 13, 2025

• directory-scripts

  Public
  Repository for scripts to support the operations of the BBMRI-ERIC Directory

  Python

  •

  GNU Lesser General Public License v3.0

  •3•2•1•2•Updated Jul 17, 2025Jul 17, 2025

• molgenis-app-canserv-explorer

  Public
  JavaScript

  •

  GNU Lesser General Public License v3.0

  •0•1•3•0•Updated Jul 15, 2025Jul 15, 2025

• miabis

  Public
  The Minimum Information About BIobank data Sharing (MIABIS) is a biobank-specific terminology enabling the sharing of minimal biobank-related data for different purposes across a wide range of database implementations.

  biobankbiobankingbiobank-data+ 2biosampledata-sharing-standard

  TypeScript

  •11•24•15•0•Updated Jul 14, 2025Jul 14, 2025

• icd-validator

  Public
  A simple Java library for validating ICD codes.

  Java

  •

  GNU General Public License v3.0

  •0•1•1•0•Updated Jun 17, 2025Jun 17, 2025

• csv2cbio

  Public
  Python

  •0•0•0•0•Updated May 12, 2025May 12, 2025

• directory-fhir

  Public
  Python

  •0•0•0•0•Updated Apr 10, 2025Apr 10, 2025

• cbioportal

  Public
  Fork of https://github.com/cbioportal/cbioportal/ for BBMRI-ERIC CI-CD deployments.

  Java

  •

  GNU Affero General Public License v3.0

  •0•0•0•0•Updated Mar 31, 2025Mar 31, 2025

• manifest

  Public
  CS-IT Software engineering practices

  HTML

  •0•0•0•0•Updated Jan 22, 2025Jan 22, 2025

• negotiator-frontend

  Public archive
  The BBMRI-ERIC Negotiator is a service for structured negotiation with biological resources dealing with human data and/or biological samples. The reference implementation for the frontend is available in this repository.

  vuejsnegotiationbiobank+ 1access-management

  Vue

  •4•12•14•2•Updated Jan 22, 2025Jan 22, 2025

• perun-negotiator-sync

  Public
  Service to synchronize access rights from the Perun Identity Management System into the BBMRI-ERIC Negotiator.

  Python

  •

  GNU Affero General Public License v3.0

  •0•0•0•0•Updated Nov 8, 2024Nov 8, 2024

• maintenance-page

  Public
  A Simple Miantenance Page

  dockersimpleerror-handling+ 2maintenanceunder-maintainance

  HTML

  •

  GNU Affero General Public License v3.0

  •0•1•0•0•Updated Oct 15, 2024Oct 15, 2024

• negotiator-v2

  Public archive
  The BBMRI-ERIC Negotiator service for structured negotiation with biological resources dealing with human data and/or biological samples.

  javanegotiationspecimen+ 1biobank

  Java

  •5•6•0•0•Updated Feb 20, 2024Feb 20, 2024

• ISO23494-PROV-demonstrator

  Public
  Jupyter Notebook

  •

  GNU Affero General Public License v3.0

  •0•0•0•0•Updated Jul 26, 2023Jul 26, 2023

• CRC-Cohort-QC

  Public
  Quality check scripts for BBMRI-ERIC CRC-Cohort

  R

  •

  MIT License

  •1•0•0•0•Updated Jan 12, 2023Jan 12, 2023

• molgenis-app-rd-explorer

  Public
  Vue application for the biobank explorer; A card detail view on BBMRI biobank - collection data

  JavaScript

  •

  GNU Lesser General Public License v3.0

  •20•0•0•0•Updated Nov 30, 2022Nov 30, 2022

• federated-platforms

  Public
  Tooling related to BBMRI-ERIC Federated Platforms.

  Go

  •0•0•0•0•Updated Nov 18, 2021Nov 18, 2021

• rd-explorer

  Public
  MOLGENIS - for scientific data: management, exploration, integration and analysis.

  Java

  •

  GNU Lesser General Public License v3.0

  •96•0•0•0•Updated Mar 16, 2021Mar 16, 2021

• miabis-xml

  Public
  Java

  •1•3•0•0•Updated Aug 30, 2015Aug 30, 2015