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    76 repositories

    • gobbler-R

      Public
      R client for the gobbler service
      R
      •
      Other
      •0•0•0•0•Updated Aug 19, 2025Aug 19, 2025

    • SewerRat

      Public
      Indexing user-defined directories on a shared filesystem
      Go
      •
      MIT License
      •0•1•0•0•Updated Aug 16, 2025Aug 16, 2025

    • SewerRat-py

      Public
      Python client for the SewerRat API
      Python
      •
      MIT License
      •0•0•0•0•Updated Aug 15, 2025Aug 15, 2025

    • SewerRat-R

      Public
      R client for the SewerRat REST API
      R
      •
      Other
      •0•0•0•0•Updated Aug 15, 2025Aug 15, 2025

    • jaspagate

      Public
      Read and write takane-formatted objects in Javascript
      JavaScript
      •
      MIT License
      •0•0•0•0•Updated Aug 7, 2025Aug 7, 2025

    • chihaya

      Public
      C++ library for validating delayed array operations saved to a HDF5 file.
      C++
      •
      MIT License
      •0•0•1•0•Updated Jul 29, 2025Jul 29, 2025

    • alabaster.base

      Public
      Base methods for the alabaster client framework
      R
      •
      Other
      •0•4•2•0•Updated Jul 25, 2025Jul 25, 2025

    • uzuki2

      Public
      R lists to HDF5... or JSON, I suppose
      C++
      •
      MIT License
      •0•1•3•0•Updated Jul 24, 2025Jul 24, 2025

    • sayoko

      Public
      Integrate gobbler projects into the SewerRat registry
      Go
      •
      MIT License
      •0•0•0•0•Updated Jul 21, 2025Jul 21, 2025

    • alabaster.matrix

      Public
      Save matrices, arrays and similar objects to file
      R
      •
      Other
      •0•0•2•1•Updated Jul 12, 2025Jul 12, 2025

    • gobbler-py

      Public
      Python client for the gobbler
      Python
      •
      MIT License
      •0•0•0•0•Updated Jul 7, 2025Jul 7, 2025

    • gobbler

      Public
      Gobbling up files on a shared filesystem
      Go
      •
      MIT License
      •0•1•0•0•Updated Jul 1, 2025Jul 1, 2025

    • takane

      Public
      Validators for ArtifactDB file formats.
      C++
      •
      MIT License
      •1•2•3•0•Updated Jun 25, 2025Jun 25, 2025

    • millijson

      Public
      Yet another JSON parsing library for C++
      C++
      •
      MIT License
      •0•0•1•0•Updated May 31, 2025May 31, 2025

    • comservatory

      Public
      Strict validation of CSV files in C++
      C++
      •
      MIT License
      •0•0•0•0•Updated May 28, 2025May 28, 2025

    • ritsuko

      Public
      Helper functions for ArtifactDB's C++ code
      C++
      •
      MIT License
      •0•0•1•0•Updated May 28, 2025May 28, 2025

    • alabaster.bumpy

      Public
      Save and load BumpyMatrix objects from file
      R
      •
      MIT License
      •0•0•0•0•Updated May 22, 2025May 22, 2025

    • dolomite-sfe

      Public
      Python
      •
      MIT License
      •0•1•1•0•Updated May 14, 2025May 14, 2025

    • dolomite-spatial

      Public
      Save and write SpatialExperiment's in Python
      Python
      •
      MIT License
      •0•1•0•0•Updated May 14, 2025May 14, 2025

    • dolomite-ranges

      Public
      Save and load genomic ranges in Python
      Python
      •
      MIT License
      •0•0•0•0•Updated Mar 23, 2025Mar 23, 2025

    • dolomite-matrix

      Public
      Save and load matrices in Python
      Python
      •
      MIT License
      •0•0•0•0•Updated Mar 10, 2025Mar 10, 2025

    • dolomite-base

      Public
      Save Bioconductor objects in Python.
      Python
      •
      MIT License
      •0•2•3•0•Updated Mar 9, 2025Mar 9, 2025

    • prebuilt-hdf5

      Public
      Prebuild HDF5 binaries for static linking
      Shell
      •0•0•0•0•Updated Mar 7, 2025Mar 7, 2025

    • archivist

      Public
      Archiving the gobbler registry
      Go
      •
      MIT License
      •0•0•0•0•Updated Feb 14, 2025Feb 14, 2025

    • gypsum-worker

      Public
      Bare-bones ArtifactDB API with Cloudflare
      JavaScript
      •
      MIT License
      •2•1•4•0•Updated Feb 11, 2025Feb 11, 2025

    • .github

      Public
      Profile page for the organization.
      0•0•0•0•Updated Jan 17, 2025Jan 17, 2025

    • dolomite-mae

      Public
      Save and load MultiAssayExperiments from file
      Python
      •
      MIT License
      •0•0•0•0•Updated Dec 24, 2024Dec 24, 2024

    • dolomite-sce

      Public
      Save and load SingleCellExperiments from file.
      Python
      •
      MIT License
      •0•0•0•0•Updated Dec 24, 2024Dec 24, 2024

    • dolomite-se

      Public
      Save and load SummarizedExperiments in Python
      Python
      •
      MIT License
      •0•0•0•0•Updated Dec 24, 2024Dec 24, 2024

    • dolomite-schemas

      Public
      Vendored schemas for Bioconductor objects
      Python
      •
      MIT License
      •0•0•0•0•Updated Dec 23, 2024Dec 23, 2024