Update Libtool patch for NAG.

Signed-off-by: Sergey Kosukhin <sergey.kosukhin@mpimet.mpg.de>

Author: skosukhin

config/ltmain_nag_pthread.diff

@@ -1,18 +1,40 @@
 --- config/ltmain.sh
 +++ config/ltmain.sh
-@@ -6417,8 +6417,14 @@
- 	func_source "$lib"
-
+@@ -7862,6 +7862,13 @@ func_mode_link ()
  	# Convert "-framework foo" to "foo.ltframework"
-+        # and "-pthread" to "-Wl,-pthread" if NAG compiler
  	if test -n "$inherited_linker_flags"; then
--	  tmp_inherited_linker_flags=`$ECHO "$inherited_linker_flags" | $SED 's/-framework \([^ $]*\)/\1.ltframework/g'`
-+          case "$CC" in
-+            *nagfor*)
-+	      tmp_inherited_linker_flags=`$ECHO "$inherited_linker_flags" | $SED 's/-framework \([^ $]*\)/\1.ltframework/g' | $SED 's/-pthread/-Wl,-pthread/g'`;;
-+            *)
-+	      tmp_inherited_linker_flags=`$ECHO "$inherited_linker_flags" | $SED 's/-framework \([^ $]*\)/\1.ltframework/g'`;;
-+          esac
+ 	  tmp_inherited_linker_flags=`$ECHO "$inherited_linker_flags" | $SED 's/-framework \([^ $]*\)/\1.ltframework/g'`
++
++	  # Additionally convert " -pthread" to " -Wl,-pthread" for nagfor
++	  func_cc_basename $CC
++	  case $func_cc_basename_result in
++	    nagfor*) tmp_inherited_linker_flags=`$ECHO "$tmp_inherited_linker_flags" | $SED 's/ -pthread/ -Wl,-pthread/g'` ;;
++	  esac
++
  	  for tmp_inherited_linker_flag in $tmp_inherited_linker_flags; do
  	    case " $new_inherited_linker_flags " in
  	      *" $tmp_inherited_linker_flag "*) ;;
+@@ -8881,7 +8888,8 @@ func_mode_link ()
+ 	  xlcverstring="$wl-compatibility_version $wl$minor_current $wl-current_version $wl$minor_current.$revision"
+ 	  verstring="-compatibility_version $minor_current -current_version $minor_current.$revision"
+           # On Darwin other compilers
+-          case $CC in
++          func_cc_basename $CC
++          case $func_cc_basename_result in
+               nagfor*)
+                   verstring="$wl-compatibility_version $wl$minor_current $wl-current_version $wl$minor_current.$revision"
+                   ;;
+@@ -9493,6 +9501,13 @@ EOF
+ 	  ;;
+       esac
+ 
++      # Time to revert the changes made for nagfor.
++      func_cc_basename $CC
++      case $func_cc_basename_result in
++        nagfor*)
++          new_inherited_linker_flags=`$ECHO " $new_inherited_linker_flags" | $SED 's% -Wl,-pthread% -pthread%g'` ;;
++      esac
++
+       # move library search paths that coincide with paths to not yet
+       # installed libraries to the beginning of the library search list
+       new_libs=