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lines changed Original file line number Diff line number Diff line change 11// Nextflow config for running on the MIT Engaging HPC cluster
22params {
33 config_profile_description = 'MIT Engaging HPC cluster profile.'
4- config_profile_contact = 'Phil Palmer (@PhilPalmer )'
4+ config_profile_contact = 'Charlie Whittaker (@bumproo )'
55 config_profile_url = "https://engaging-web.mit.edu/eofe-wiki/"
66}
77
@@ -12,16 +12,20 @@ singularity {
1212
1313process {
1414 resourceLimits = [
15- memory: 64 .GB,
15+ memory: 128 .GB,
1616 cpus: 16,
17- time: 12 .h
17+ time: 10 .h
1818 ]
1919 executor = 'slurm'
20- clusterOptions = '-p sched_mit_hill'
20+ clusterOptions = '-p mit_normal'
21+ }
22+
23+ executor {
24+ queueSize = 8
2125}
2226
2327params {
24- max_memory = 64 .GB
28+ max_memory = 128 .GB
2529 max_cpus = 16
26- max_time = 12 .h
30+ max_time = 10 .h
2731}
Original file line number Diff line number Diff line change 11// Nextflow config for running on the Koch Institute of MIT Luria HPC cluster
22params {
33 config_profile_description = 'KI at MIT Luria HPC cluster profile.'
4- config_profile_contact = 'Charlie Whittaker (@Charlie14557807 )'
4+ config_profile_contact = 'Charlie Whittaker (@bumproo )'
55 config_profile_url = "https://igb.mit.edu/computing-resources/luria-cluster"
66}
77
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