0.1.5

New features

• Upgrade to BLAST+ 2.12.0
• Experimental 2-stage cloud query split
• Record configuration in results bucket metadata
• Stress test added
• ElasticBLAST is available from PyPI and BioConda now

Improvements

• blast-tuner uses mem-limit and machine-type suggestions based on BLASTDB metadata
• OutOfMemoryError bug handled systematically

0.1.4

New features

• Implement tool to create BLASTDB metadata
• Distribute ElasticBLAST on PyPI.org: https://pypi.org/project/elastic-blast/0.1.4/

Improvements

• Add negative_taxidlist support to ElasticBLAST
• Use autoscaling by default for ElasticBLAST on GCP

Bug fixes

• Detect unbalanced quotation marks in BLAST options and report error

0.1.3

Improvements

• Added verbose option for elastic-blast status
• Selection of MT mode, number of CPUs and batch length in blast-tuner
• Elastic-blast can use instances with local SSD in AWS
• Elastic-blast works with "optimal" instance type in AWS
• Creation of PEX files on github
• Resubmission of an elastic-blast search elicits an error message

Bug fixes

• Cleaning of query batches on local machine's /tmp directory

0.1.2

Improvements

• Output file names unified over GCP and AWS versions

Bug fixes

• Retry logic implemented to handle database download errors and job structural timeouts