Adding mouse liver and heart gene marker files

asaravia-butler · web-flow · commit c8dc6b6cb20d · 2024-03-06T15:36:39.000-08:00
diff --git a/scRNAseq/10X_Chromium_3prime_Data/GeneLab_CellType_GeneMarkers/GL-DPPD-7111_GeneMarker_Files/GL-DPPD-7111_Mmus_Heart_CellType_GeneMarkers.csv b/scRNAseq/10X_Chromium_3prime_Data/GeneLab_CellType_GeneMarkers/GL-DPPD-7111_GeneMarker_Files/GL-DPPD-7111_Mmus_Heart_CellType_GeneMarkers.csv
@@ -0,0 +1,10 @@
+speciesType,tissueType,cellName,geneSymbol
+Mouse,Heart,Fibroblast,"Thy1, Col1a2,  Col3a1,  Fbln2,  Fstl1,  Gsn,  Mmp2,  Sparc,  Vim, Itgae,  Il1r1,  Pdgfra,  Pdgfrb,  Itgb1,  Cd47,  Cd81,  Lrp1, 1810037I17Rik,  Pclaf,  Dmac1,  ACAP2,  SLF1,  ANP32E,  ARL6IP6,  ARMCX3,  Atad2,  Birc5,  Bmp5,  Bub1,  Bud31,  Capn6,  Ccdc34,  Ccna2,  Ccnb1,  Ccnb2,  Cdc7,  Cdca3,  Cenpa,  Cenpe,  Cenpf,  Cep57,  Cks2,  Cnot6,  Csrp2,  Dctpp1,  Ddah2,  Dhx9,  Enc1,  Epha3,  Evi5,  Exosc8,  Tcaf1,  Fam173a,  Pimreg,  Fbln1,  Fgf7,  Fkbp7,  Gnpat,  Gps1,  Gstm5,  H2afv,  H2afx,  H2afz,  Hist1h2ab,  Hmgb1,  Hmgb2,  Hnrnpa3,  Hoxb5,  Htatsf1,  Iigp1,  Kif15,  Kif20b,  Knstrn,  Mad2l1,  Mcm4,  Mdk,  Mfap2,  Mis18bp1,  Mki67,  Mrpl27,  Mrpl39,  Mrpl49,  Mrto4,  Mycbp,  Naa50,  Ncapg,  Ndufs5,  Nexn,  Nrep,  Nusap1,  Pbk,  Pmf1,  Prim1,  Psmd6,  Ptch1,  Rab34,  Rfc4,  Rhno1,  Rn7sk,  Rpa1,  NA,  Rrm2,  Scnm1,  Sdc2,  Shcbp1,  Sin3a,  Ska2,  Smc2,  Smchd1,  Stmn1,  Tacc3,  Taf12,  Tbpl1,  Tbx3,  Tk1,  Tmed1,  Tnc,  Top2a,  Tpx2,  Trp53bp1,  Tshz1,  Tuba1a,  Tuba1b,  Tubb5,  Ube2c,  Uqcr10,  Utp11,  Zranb1, Ckap4, Abi3,  Ace,  Adgre4,  Ap1s2,  Arl5c,  Ccdc88a,  Ccr2,  Cd209a,  Cd300a,  Cd300e,  Chil3,  Clec10a,  Clec12a,  Clec4a1,  Clec4a3,  Cytip,  Ear2,  Eno3,  F13a1,  Fam49a,  Fam49b,  Fgr,  Filip1l,  Flna,  Fn1,  G6pdx,  Gm2a,  Gngt2,  Gpr141,  Hck,  Hfe,  Ifi27l2a,  Ifi30,  Ifitm3,  Irf7,  Itgal,  Lgals3,  Lst1,  Ly6i,  Lyn,  Lyz2,  Mob1a,  Mpeg1,  Ms4a4c,  Ms4a6c,  Ms4a6d,  Msn,  Naaa,  Nadk,  Napsa,  Nr4a1,  Pip4k2a,  Pitpna,  Plac8,  Plbd1,  Prkcd,  Psap,  Psma7,  Ptpn1,  Ptpn6,  Rap1a,  S100a4,  Samhd1,  Sat1,  Serpinb10,  Stk10,  Tgfb1,  Tgfbi,  Tkt,  Tmcc1,  Tnfrsf1b,  Tppp3,  Treml4,  Ucp2, Col5a2,  Thy1"
+Mouse,Heart,Cardiomyocyte,"Tnnc1, Acta1,  Actc1,  Atp2a2,  Myh6,  Nppa,  Ryr2,  Tnnc1,  NA, Tnnt2, Actc1,  Actn2,  Gja1,  Hand2,  Tnnt2, Vcam1, Gja1, Alcam, Itga1,  Itga5,  Itga6,  Cdh2, Bmp4,  Emcn,  Fbn1,  Gata4,  Hand1,  Mef2c,  Myl4,  Neb,  Nid1,  Tbx20,  Tbx3,  Vim"
+Mouse,Heart,Cardiac progenitor cell,"Hcn4, Alcam,  Isl1, Kit"
+Mouse,Heart,Sinoatrial node cell,Isl1
+Mouse,Heart,Atrial cell,"Itga1,  Itga5,  Itga6"
+Mouse,Heart,Ventricular compact cell,"Itga1,  Itga5,  Itga6"
+Mouse,Heart,Ventricular trabecular cell,"Itga1,  Itga5,  Itga6"
+Mouse,Heart,Endothelial cell,"Eng,  Itgam,  Pecam1,  Ptprc,  Flt1,  Kdr, Pecam1, Rgs5, Ednrb,  Egfl7,  Emcn,  Epas1,  Fabp4,  Tie1, Egfl7, Cd34,  Eng,  Tek,  Cdh5, Nos3,  Plvap, Cdh5, Kdr, Fcgr2b,  Lyve1, Icam2,  Vcam1,  Ifngr1,  Il3ra,  Anpep,  Cxcr2,  Tlr2,  Cd34,  Cd44,  Itga2,  Icam1,  Sell,  Sele,  Selp,  Cd93,  Ly6c1,  MHC class II,  Pdpn,  Flt4,  Mcam,  Itgb3, 2810025M15Rik,  4931406P16Rik,  Jcad,  Ablim1,  NA,  Ace,  Acvrl1,  Adam15,  Agfg1,  Ahr,  Ankrd37,  Aplnr,  Arap2,  Arap3,  Arhgap18,  Arhgap31,  Arhgef15,  BC028528,  Bcl6b,  Calcrl,  Casz1,  Cav1,  Cav2,  Cd200,  Cd36,  Adgre5,  Cldn5,  Clec14a,  Clec1a,  Clec9a,  Cobll1,  Col4a1,  Copg2,  Cpne8,  Crip2,  Ctla2a,  Rtl8a,  Rtl8b,  Dpysl3,  Ecscr,  Edil3,  Efna1,  Elk3,  Ephb4,  Esam,  Ets1,  F11r,  Fam198b,  Fgd5,  Fkbp1a,  Fli1,  Fxyd5,  Gap43,  Gata2,  Gchfr,  Gimap1,  Gimap4,  Gimap5,  Gimap6,  Gmfg,  Gpihbp1,  Adgrf5,  Grap,  Guk1,  Hey1,  Ica1,  Icam2,  Il2rg,  Itga6,  Jup,  Kctd12b,  Kit,  Klhl4,  Ldb2,  Lmo2,  Luzp1,  Lxn,  Ly6e,  Mest,  Mfng,  Mid2,  Afdn,  Mmrn2,  Myct1,  Myzap,  Nos3,  Nostrin,  Npdc1,  Nup210,  Pcdh12,  Pcdh17,  Pde4b,  Piezo2,  Plekha1,  Ppm1f,  Ppp1r16b,  Prkch,  Ptprb,  Ptprm,  Cavin1,  Ramp2,  Rasgrp3,  Rasip1,  Rgcc,  Rhoj,  Rnf122,  S100a10,  S100a16,  Scarb1,  Scarf1,  Scn3b,  Scn7a,  Sgk1,  Slc43a3,  Slc9a3r2,  Smad1,  Smtn,  Snrk,  Srgn,  Stab2,  Stard4,  Thsd1,  Tjp1,  Tm4sf1,  Tmem2,  Tmem88,  Tnfaip8l1,  Trp53i11,  Tspan13,  Txnip,  Vim,  Clic5,  Cyyr1,  Edn1,  Tspan7, Acta2,  Actg2,  Igfbp7,  Myl9,  Sparcl1,  Tagln, Aplnr,  Aqp1,  Fbln2,  Pitp family,  Cavin2,  Sox17,  Vwf,  Fn1, Lyve1,  Sox18, Abcb1a,  Apcdd1,  Ccdc141,  Cgnl1,  Adgrl4,  Erg,  Fzd6,  Hmcn1,  Hspg2,  Lmntd1,  Itga1,  Itga4,  Lama4,  Ly75,  Mecom,  Mfsd2a,  Rassf9,  Rbpms,  Rgs5,  Slc16a1,  Slc22a8,  Slc40a1,  Slc7a1,  Slc7a5,  Slco1a4,  Slco1c1,  Slco2b1,  Sparc,  St3gal6,  Wwtr1,  Zfp366, Bmp2,  C1qtnf1,  Dpp4,  F8,  Il1a,  Myf6,  Oit3,  Ushbp1"
+Mouse,Heart,Macrophage,"Fcgr3,  Mrc1,  Fcer2a, Ly6c1,  Ly6g,  NA, Csf1r, Pdcd1lg2, macrophage galactose-type C-type lectin family, Adgre1, Dock2, Cd163,  Cd68,  Cd74,  Adgre1,  Itgam,  Lgals3,  Lyz1, Cd68, Itgax, Itgam, Mrc1, Cd40,  Nos2, Cd200r1, Kit,  Prom1,  Pecam1,  F8,  S100 family,  Kdr,  Itgax, Arg1,  Il10,  VEGF family,  Chil3,  MHC class II,  Fcgr1, Cd19,  Cd3d,  Cd3e,  Cd3g,  Klrb1c, Ptprc,  Mertk, Axl,  Lamp1,  Lamp2,  Csf1r,  Fcgr3,  Tlr2,  Tlr4,  Cdh1,  Cd40,  Tnfsf18,  Gpnmb,  MHC Class II,  cd68,  Cd14, C1qa,  C1qb,  C1qc,  Ccl12,  Cd209f,  Clec4n,  Coro1a,  Ctss,  Cxcl2,  F13a1,  Folr2,  Gatm,  Gmfg,  Lsp1,  Lyz2,  Ms4a7,  Pf4,  Pld4,  Rgs1,  Srgn,  Tyrobp,  Unc93b1, Abhd12,  Adap2,  Adrb1,  Aif1,  Apobec1,  Apoe,  Asah1,  Axl,  Basp1,  Bcl2a1b,  C1qa,  Cadm1,  Cd72,  Cd83,  Cd86,  Cdk6,  Cfh,  Clec4a2,  Clec4b1,  Col14a1,  Creb5,  Cst3,  Ctsc,  Ctsh,  Cx3cr1,  Cxcl16,  Cyth4,  Ebi3,  Fcgr2b,  Fcgr4,  Fgd2,  Fnbp1,  Fyb,  Gm4951,  Gpr65,  Gusb,  H2-Aa,  H2-Ab1,  H2-DMa,  H2-DMb1,  H2-Eb1,  Hpgds,  Hspa1a,  Ifnar1,  Inpp5d,  Itm2c,  Lacc1,  Lair1,  Lat2,  Lilra5,  Lpar6,  Ly86,  Marcks,  Mgl2,  Mknk1,  Mmp13,  Ntpcr,  P2ry6,  Parp14,  Pea15a,  Pid1,  Ppt1,  Rab7b,  Rbpj,  Rgs10,  Rtn4,  Runx1,  Scimp,  Sdc3,  Sft2d1,  Slamf9,  Slco2b1,  Stab1,  Stap1,  Stx16,  Taok3,  Tgfbr1,  Tmcc3,  Tmem176b,  Trf,  Vcam1,  Vsir,  Zmynd15, C1qb, Basp1,  Bst2,  Cd5l,  Cd79b,  Gzma,  S100a4, Lrmda,  Abca9,  Aoah,  Arhgap15,  Bank1,  Cd84,  Cmah,  Colec12,  Ctsb,  Dab2,  Dclre1c,  Ddx60,  Dock2,  Dock8,  Ehd4,  Fli1,  Gas6,  Ikzf1,  Lgmn,  Lyn,  Maf,  P2rx7,  P2ry12,  Pik3ap1,  Pnpla7,  Rbm47,  Rreb1,  Sirpa,  Slc9a9,  Snx2,  Stard8,  Tbxas1,  Tgfbr2,  Tnfaip8,  Tnfrsf11a,  Wdfy4,  Zfp710"
diff --git a/scRNAseq/10X_Chromium_3prime_Data/GeneLab_CellType_GeneMarkers/GL-DPPD-7111_GeneMarker_Files/GL-DPPD-7111_Mmus_Liver_CellType_GeneMarkers.csv b/scRNAseq/10X_Chromium_3prime_Data/GeneLab_CellType_GeneMarkers/GL-DPPD-7111_GeneMarker_Files/GL-DPPD-7111_Mmus_Liver_CellType_GeneMarkers.csv
@@ -0,0 +1,20 @@
+speciesType,tissueType,cellName,geneSymbol
+Mouse,Liver,Liver progenitor cell,"Ascl2,  Krt19,  Dlk1,  Epcam"
+Mouse,Liver,Ito cell (hepatic stellate cell),"Syp, Stx2, Acta2,  Des, Igfbp3, Des,  Gfap"
+Mouse,Liver,Liver stem cell,"Eng,  Itgb1,  Cd44,  Epcam,  Gata4"
+Mouse,Liver,Myofibroblast,"Nt5e, Acta2,  Myh11,  Tagln,  Des,  Fn1,  Col1a1,  Jun,  Aspn,  Hhip,  Junb,  Mustn1,  Scx"
+Mouse,Liver,B cell,"Ptprc, Spn,  Ptprc,  Cd40lg, Cd19,  Cd79a,  Cd19,  Cd5,  Adgre1, Gstm1, Fasn, Cd22,  Spn, Ms4a1, Cd5,  Cd24a, Kit, Bcr,  Enpep,  Ccr10,  Itgae,  Kit,  Ifngr1,  Itgam,  Il2rb,  Il6ra,  Il7r,  Sdc1,  Fcgr3,  Cxcr4,  Cxcr5,  Cd1d1,  Ms4a1,  Cr2,  Cd22,  Fcer2a,  Il2ra,  Cd27,  Pdcd1lg2,  Pecam1,  Bst2,  Slamf7,  Cdh1,  Cd320,  Cd34,  Tnfrsf18,  Cd38,  Entpd1,  Cd40,  Cd44,  Itga2,  Sell,  Nt5e,  Cd80,  Cd84,  Cd86,  Cd9,  Cd93,  Flt3,  IgD family,  Il1r1,  Il1r2,  MHC Class II,  NA,  Ly6a, Cd180,  Tnfsf4,  Cd36,  Cd69,  Cd81, Cd79a,  Cd79b,  Ly6d,  Mzb1, Cd69,  Cxcl10,  Ifi47,  Ifit1,  Ifit2,  Ifit3,  Igtp,  Irf7,  Irgm1,  Isg15,  Isg20,  Mx1,  Oasl1,  Parp14,  Rgs1,  Rsad2,  Usp18, 4930523C07Rik,  Bank1,  Blnk,  Btla,  Cd37,  Ckap4,  Cmah,  Creld2,  Derl3,  Dnajc3,  Eaf2,  Ebf1,  Edem1,  Edem2,  Fam46c,  Fchsd2,  Fcmr,  Fcrla,  Fkbp11,  Gm8369,  H13,  H2-DMb2,  H2-Oa,  H2-Ob,  Hsp90b1,  Hspa5,  Hvcn1,  Jchain,  Krtcap2,  Manf,  Mef2c,  Pafah1b3,  Pax5,  Pold4,  Pou2af1,  Prdx4,  Ptp4a3,  Ralgps2,  Rexo2,  Scd1,  Sdf2l1,  Sec11c,  Sec61a1,  Sec61b,  Serp1,  Siglecg,  Slpi,  Smap2,  Snx2,  Spcs3,  Spib,  Srp9,  Ssr4,  Tnfrsf13b,  Tnfrsf13c,  Tnfrsf17,  Trp53inp1,  Txndc11,  Txndc5,  Vpreb3,  Xbp1, Fcrla,  Vpreb1, Cd79b"
+Mouse,Liver,Cancer stem cell,"Pou5f1, Lgr6, Prom1,  Myc,  Klf4,  Pou5f1,  Sox2, Kit,  Ly6a, Alcam, Itga6,  Itgb3, Aldh1a1,  Pecam1,  Cd44,  Egfr,  Mki67, Cd44,  Dclk1, Dclk1, Nanog,  Prom1,  Fut4,  Cd24a,  Lgr5, Ly6a, Myc,  Nanog, Abcg2, Cd24a,  Itgb1,  Itga6, Cd34,  Cd38,  Cd47,  Ptprc,  Dll1,  Dner,  Flot2,  Thy1,  Alcam,  Epcam, Anpep,  Cxcr4,  Cd24,  Cd34, Abcb5,  Abcg2,  Ms4a1,  Ngfr"
+Mouse,Liver,Dendritic cell,"Itgax,  Cd74,  Cd83,  Cd86,  Cd80,  Tlr9, Ccr7,  Itgax,  Cd40,  MHC class II, Cd80, Cd83, Itgam,  Cd19,  Cd3d,  Cd3e,  Cd3g,  Ly6g,  Klrb1c, MHC class II,  Cd24a,  Ptprc,  Siglecf,  Xcr1, Nectin2, Cd209a,  Flt3,  H2-Eb1,  Cd14,  Fcgr3, Cd74,  Cebpa,  Chd3,  Elf1,  Etv6,  Foxp1,  Id2,  Irf8,  Nfe2,  Spi1,  Sox4,  Stat3, Basp1,  Ccl5,  Fscn1,  S100a4,  Tcf7, Ccl22,  Ccr7,  Cst3,  H2-Ab1,  Ifit1, Batf3,  Ifi205,  Mycl,  Slamf7,  H2-Aa"
+Mouse,Liver,Endothelial cell,"Eng,  Itgam,  Pecam1,  Ptprc,  Flt1,  Kdr, Pecam1, Rgs5, Ednrb,  Egfl7,  Emcn,  Epas1,  Fabp4,  Tie1, Egfl7, Cd34,  Eng,  Tek,  Cdh5, Nos3,  Plvap, Cdh5, Kdr, Fcgr2b,  Lyve1, Icam2,  Vcam1,  Ifngr1,  Il3ra,  Anpep,  Cxcr2,  Tlr2,  Cd34,  Cd44,  Itga2,  Icam1,  Sell,  Sele,  Selp,  Cd93,  Ly6c1,  MHC class II,  Pdpn,  Flt4,  Mcam,  Itgb3, 2810025M15Rik,  4931406P16Rik,  Jcad,  Ablim1,  NA,  Ace,  Acvrl1,  Adam15,  Agfg1,  Ahr,  Ankrd37,  Aplnr,  Arap2,  Arap3,  Arhgap18,  Arhgap31,  Arhgef15,  BC028528,  Bcl6b,  Calcrl,  Casz1,  Cav1,  Cav2,  Cd200,  Cd36,  Adgre5,  Cldn5,  Clec14a,  Clec1a,  Clec9a,  Cobll1,  Col4a1,  Copg2,  Cpne8,  Crip2,  Ctla2a,  Rtl8a,  Rtl8b,  Dpysl3,  Ecscr,  Edil3,  Efna1,  Elk3,  Ephb4,  Esam,  Ets1,  F11r,  Fam198b,  Fgd5,  Fkbp1a,  Fli1,  Fxyd5,  Gap43,  Gata2,  Gchfr,  Gimap1,  Gimap4,  Gimap5,  Gimap6,  Gmfg,  Gpihbp1,  Adgrf5,  Grap,  Guk1,  Hey1,  Ica1,  Icam2,  Il2rg,  Itga6,  Jup,  Kctd12b,  Kit,  Klhl4,  Ldb2,  Lmo2,  Luzp1,  Lxn,  Ly6e,  Mest,  Mfng,  Mid2,  Afdn,  Mmrn2,  Myct1,  Myzap,  Nos3,  Nostrin,  Npdc1,  Nup210,  Pcdh12,  Pcdh17,  Pde4b,  Piezo2,  Plekha1,  Ppm1f,  Ppp1r16b,  Prkch,  Ptprb,  Ptprm,  Cavin1,  Ramp2,  Rasgrp3,  Rasip1,  Rgcc,  Rhoj,  Rnf122,  S100a10,  S100a16,  Scarb1,  Scarf1,  Scn3b,  Scn7a,  Sgk1,  Slc43a3,  Slc9a3r2,  Smad1,  Smtn,  Snrk,  Srgn,  Stab2,  Stard4,  Thsd1,  Tjp1,  Tm4sf1,  Tmem2,  Tmem88,  Tnfaip8l1,  Trp53i11,  Tspan13,  Txnip,  Vim,  Clic5,  Cyyr1,  Edn1,  Tspan7, Acta2,  Actg2,  Igfbp7,  Myl9,  Sparcl1,  Tagln, Aplnr,  Aqp1,  Fbln2,  Pitp family,  Cavin2,  Sox17,  Vwf,  Fn1, Lyve1,  Sox18, Abcb1a,  Apcdd1,  Ccdc141,  Cgnl1,  Adgrl4,  Erg,  Fzd6,  Hmcn1,  Hspg2,  Lmntd1,  Itga1,  Itga4,  Lama4,  Ly75,  Mecom,  Mfsd2a,  Rassf9,  Rbpms,  Rgs5,  Slc16a1,  Slc22a8,  Slc40a1,  Slc7a1,  Slc7a5,  Slco1a4,  Slco1c1,  Slco2b1,  Sparc,  St3gal6,  Wwtr1,  Zfp366, Bmp2,  C1qtnf1,  Dpp4,  F8,  Il1a,  Myf6,  Oit3,  Ushbp1"
+Mouse,Liver,Hepatocyte,"Krt18, Afp, Albumin family,  Afp,  NA, Acly,  Alb,  Apoa1,  Asl,  Ass1,  Cyp2e1,  Cyp2f2,  G6pc,  Glul,  Mup3,  Pck1"
+Mouse,Liver,Kupffer cell,"Cd68,  Clec4f,  Adgre1, Clec4f,  Irf7,  Spic"
+Mouse,Liver,Monocyte,"Cd48, Ly6c1,  Ly6g,  NA, Itgam,  Cd68,  Adgre1, Adgre1, Ly6g,  Ly6c1,  Cd19,  Cd3d,  Cd3e,  Cd3g,  Klrb1c, Csf1r,  Itgam,  Cx3cr1, Ccr2,  Csf1r,  Ly6c2, Itgax,  Cd14,  Fcgr3, Pithd1,  Ppp1r18,  ,  2310061I04Rik,  Abcd1,  Abr,  Acap2,  Adcy7,  Add1,  Add3,  Adipor1,  AI467606,  Alkbh7,  Ap1m1,  App,  Arhgap1,  Arhgdib,  Arhgef18,  Arpp19,  Aurkaip1,  B9d2,  Bin1,  Brd4,  Bri3,  Calm2,  Ccnd1,  Cd180,  Cd7,  Cdc42se2,  Cdk5rap3,  Cfp,  Chka,  Chst12,  Clic1,  Clta,  Commd7,  Cox8a,  Crip1,  Csk,  Csnk1g2,  Cst3,  Ctnnb1,  Cux1,  Cxcr3,  Cyp27a1,  Dcaf15,  Dctpp1,  Dcxr,  Ddb1,  Ddx42,  Def6,  Dhx57,  Dscr3,  Emp3,  Etfb,  Fam168b,  Fkbp15,  Foxo1,  Fxyd5,  Gimap6,  Gpi1,  Grap,  Gtf3a,  H2-Ke6,  Hadhb,  Hagh,  Hdac5,  Herpud1,  Hip1r,  Hmgcl,  Hnrnpl,  Hspa1b,  Ifnar2,  Igsf8,  Il17ra,  Itgb7,  Kcnn4,  Klf13,  Klf2,  Klf3,  Ldb1,  Lgals3,  Lime1,  Lrwd1,  Madd,  Map3k3,  Map4k1,  Mbtps1,  Mrpl18,  Mrpl40,  Myh9,  Naa10,  Nbeal2,  Ndufb5,  Nipbl,  Npc1,  Nrm,  Nub1,  Nudt16l1,  Phax,  Pnn,  Pnpla7,  Ppp1ca,  Prkacb,  Prkd2,  Psmd4,  Ptpn6,  Rasal3,  Rasgrp2,  Rbm38,  Reep4,  Rheb,  S1pr4,  Sgk1,  Slc50a1,  Slpi,  Smc4,  Snx3,  Sra1,  Srsf9,  Stk38,  Sumf1,  Tbc1d10c,  Tbc1d17,  Tcp11l2,  Tmed3,  Tmem14c,  Tmem160,  Tmem208,  Tmem59,  Tpi1,  Tpm1,  Tprgl,  Trim8,  Tsnax,  Tspan32,  Vim,  Vps16,  Wbp2,  Wdfy4,  Ly86, Tmem258,  Ass1,  C1galt1c1,  Clec7a,  Ctsc,  Ctss,  Cxcr4,  Emb,  F13a1,  Glipr1,  Gria3,  Hpse,  Klf4,  Lgals1,  Mefv,  Mfsd1,  Ms4a6c,  Papss2,  Prdx4,  Psma2,  Rassf4,  Rgs10,  S100a10,  S100a4,  Tfec,  Tgfbi,  Tifab,  Trem2, Hbb-bs,  Car2,  Cited4,  E2f4,  Gata1,  Gata2,  Gfi1b,  Hba-a2,  Hmgb3,  Klf1,  Mbd2,  Phb2,  Phf10,  Tcf3,  Zfpm1, Ccl6,  Cebpb,  Cmpk2,  Ctsd,  Cxcl1,  Cxcl2,  Cxcl3,  Ifit1,  Il1b,  Il6,  Ly6e,  Lyz2,  Ptgs2,  Tnf, Ctss,  Cybb,  Irf8,  Ly6a"
+Mouse,Liver,Hepatoblast,Afp
+Mouse,Liver,Natural killer cell,"Klrb1c, Itga1,  Cxcr6, Itgax,  Ncr1, Itgae,  Itgae,  Kit,  Ifngr1,  Il2rb,  Il7r,  Fcgr3,  Cd160,  Klrb1,  Klrb1b,  Klrb1c,  Cxcr2,  Cxcr3,  Ccr6,  Cd1d1,  Cd2,  Il12rb1,  Pecam1,  Klrk1,  Slamf7,  Cd34,  Cd4,  Spn,  Cd44,  Ptprc,  Itga2,  B3gat1,  Cd69,  Cd8a,  Plaur,  Thy1,  Klrd1,  Cd96,  Cx3cr1,  Flt3,  Klrg1,  MHC class II,  Zbtb16,  Rorc,  Ly6a,  Il1rl1, Itgam,  Cd226,  Il2ra,  Nfil3,  Eomes,  Gata3,  Id2,  Ly-49 family,  Runx1,  Agpat2,  Tigit,  Tox, Klra8,  Klrc1, Fcgr3,  Ncam1, Cap1,  Ccl5,  Ccnd2,  Chsy1,  Cma1,  Cst7,  Ctla2b,  Ctsw,  Dapk2,  Dok2,  Dusp2,  Fasl,  Gem,  NA,  Gzma,  Gzmb,  Hsd11b1,  Ifitm10,  Il18rap,  Irf8,  Itgb2,  Jak1,  Klra1,  Klra4,  Klra7,  Klra8,  Klra9,  Klrb1a,  Klrb1f,  Klrc2,  Klre1,  Lamb3,  Lfng,  Nkg7,  Pole4,  Prf1,  Samd3,  Tbx21,  Txk,  Ugcg,  Vps37b, Ccl5,  Cebpa,  Etv6,  Foxp1,  Mpo,  Spi1,  Stat3"
+Mouse,Liver,Progenitor cell,"Msra, Alcam,  Prom1, Pvalb, Myf5,  Pax7, Cd34,  NA, Nes, Bmi1, Krt19,  Sox9, Prom1,  Krt19, Nanog, Kit,  Thy1, Twf1, Itga2b, Krt14,  Krt17,  Krt5,  Tcp1, Cd24a,  Itga6,  Ly6a, Ly6a, Ascl1,  Slamf1,  Cd34,  Cd48,  Flt3"
+Mouse,Liver,Stem cell,"Msra, Lgr5, Pdx1, Cd44,  Lgr5, Msi1, Kit,  Prom1,  Cd24a,  Itga6, Ly6a, Nes, Eng, Myc,  Cd44, Fgfr3, Itgb3,  Itgb1,  Itga5,  Ly6a, Epcam,  Pou5f1,  Thy1, Afp, Nanog, Isl1,  Nanog,  Sox2, Cd24a, Cd34,  Sox9,  Tcf4, Krt15,  Cd34,  Sdc1,  Slc3a2, Smim6,  4931406C07Rik,  Acot1,  NA,  Aldoc,  Arxes2,  Basp1,  Bgn,  Car2,  Cd27,  Cd274,  Cd74,  Cd81,  Cdhr4,  Cish,  Clip3,  Dapp1,  Dkkl1,  Fchsd2,  Gabarapl1,  Gcnt2,  Gimap1,  Gimap6,  Gm12185,  H2-K1,  H2-T10,  H2-T22,  H2-T23,  H2-T9,  Hlf,  Hoxb2,  Ifitm1,  Ifitm2,  Ifitm3,  Krt18,  Ldhb,  Lhcgr,  Lmo2,  Lst1,  Mecom,  Mllt3,  Mpl,  Msi2,  Mycn,  Myct1,  Myl10,  Nfe2,  Oasl2,  Osbpl1a,  Pcp4l1,  Pde4b,  Pdzk1ip1,  Pglyrp2,  Pla2g16,  Pnrc1,  Procr,  Ptpn18,  Ptprcap,  Rbp1,  Rbpms,  Rbpms2,  Rgs1,  Rtp4,  Serpina3f,  Serpina3g,  Shisa5,  Srgn,  Stxbp4,  Tbxas1,  Tgtp2,  Tmem176a,  Tmem176b,  Tnip3,  Txnip,  Uba7,  Ube2l6,  Wfdc2,  Whamm,  Zfand5,  Zfp608,  Zfp831"
+Mouse,Liver,CD4+ T cell,"Cd4,  Ly6c1, Cd44,  Ptprc,  Sell, Il7r,  Tnfrsf4,  Tnfrsf9,  Cd40lg,  Il2ra,  Cd27,  Btla,  Icos,  Cd28,  Cd3d,  Cd3e,  Cd3g,  Cd4,  Cd44,  Cd5,  Sell,  Sele,  Selp,  Cd69,  Cd7,  Ctla4,  Pdcd1,  Igfbp4,  Tcf7,  Trbc2"
+Mouse,Liver,Cytotoxic T cell,"Cd4,  Cd8a, Cd8a, Itgae,  Il7r,  Cd200,  Il2ra,  Cd3d,  Cd3e,  Cd3g,  Cd34,  Cd38,  Cd4,  Cd44,  Ptprc,  Cd5,  Sell,  Cd7,  Flt3,  NA"
+Mouse,Liver,Regulatory T (Treg) cell,"Itga2,  Lag3, Il2ra,  Cd4,  Itga2, Nrp1,  Foxp3,  Cd3d,  Cd3e,  Cd3g,  Entpd1,  Ptprc,  Nt5e,  Ikzf2,  Il10,  Il12a,  Ebi3,  Mki67,  TGF-beta family, Cd101,  Il1r1,  Il1r2,  Tnfrsf9,  Ctla4,  Il2ra,  Nrp1,  Tnfrsf18,  Rel,  Ikzf4,  Izumo1r,  Lrrc32,  NA,  Stat5a,  Stat5b,  Tigit, Izumo1r,  Tcf7,  Trbc2"
+Mouse,Liver,T cell,"Cd3d,  Cd3e,  Cd3g, Cd4, Cd8a,  Cd8a,  NA, Cd2,  Cd4,  Cd5, Sell, Gstm1, Thy1,  Thy1, Cd44,  Sell,  Cd69,  Pdcd1, Ccr10,  Itgae,  Kit,  Ifngr1,  Itgax,  Il2rb,  Il6ra,  Il7r,  Pdgfra,  Pdgfrb,  Slamf1,  Cd40lg,  Cd160,  Klrb1b,  Klrb1c,  Fasl,  Cxcr3,  Cxcr4,  Cxcr5,  Ccr3,  Ccr4,  Ccr5,  Ccr6,  Cd1d1,  Cd2,  Cd200,  Il12rb1,  Il18r1,  Cd24a,  Il2ra,  Ptgdr2,  Cd3d,  Pecam1,  Cd34,  Cr2,  Tnfrsf18,  Cd38,  Entpd1,  Cd40,  Spn,  Cd44,  Ptprc,  Itga2,  Itgav,  B3gat1,  Itgb3,  TFRC,  Nt5e,  Cd80,  Cd84,  Plaur,  Klrd1,  Cd96,  Ccr8,  Cx3cr1,  Flt3,  Foxp3,  Il1r1,  Il1r2,  Il1r1,  Il1r2,  Il21r,  Il9,  Zbtb16,  Rorc,  Ly6a, Cd3e, Bcl11b,  Cxcr6,  Fam189b,  Gimap3,  Itk,  Lef1,  Ltb,  Rapgef6,  Rasgrp1,  Rpl12,  Rplp1,  Rps16,  Rps23,  Rps4x,  Satb1,  Socs2,  Tpt1"
