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NF_MAAgilent1ch: address #82
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  • Microarray/Agilent_1-channel/Workflow_Documentation/NF_MAAgilent1ch/workflow_code/modules

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Microarray/Agilent_1-channel/Workflow_Documentation/NF_MAAgilent1ch/workflow_code/modules/AGILE1CH.nf

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@@ -30,6 +30,8 @@ process AGILE1CH {
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script:
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def limit_biomart_query_parameter = limit_biomart_query ? "-P DEBUG_limit_biomart_query:${limit_biomart_query}" : ''
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"""
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export HOME=\$PWD;
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quarto render \$PWD/${qmd} \
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-P 'runsheet:${runsheet_csv}' \
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-P 'annotation_file_path:${annotation_file_path}' \

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