Adding v1.2.2 changes

Author: asaravia-butler

Amplicon/Illumina/Workflow_Documentation/SW_AmpIllumina-B/CHANGELOG.md

@@ -1,5 +1,11 @@
 # Workflow change log
 
+## [1.2.2](https://github.com/nasa/GeneLab_Data_Processing/tree/SW_AmpIllumina-B_1.2.2/Amplicon/Illumina/Workflow_Documentation/SW_AmpIllumina-B)
+- Visualizations are now optional with the default being off.
+  - Enable with optional `run_workflow.py` argument `--visualizations TRUE` or setting `config.yaml` `enable_visualizations` to "TRUE"
+- Moved the visualization script from `workflow_code/scripts/` to new folder `workflow_code/visualizations/`
+- Refactored Snakefile outputs
+
 ## [1.2.1](https://github.com/nasa/GeneLab_Data_Processing/tree/SW_AmpIllumina-B_1.2.1/Amplicon/Illumina/Workflow_Documentation/SW_AmpIllumina-B)
 - Moved SW_AmpIllumina-A_1.2.1 to SW_AmpIllumina-B_1.2.1
 - Workflow runs the [GL-DPPD-7104-B version](../../Pipeline_GL-DPPD-7104_Versions/GL-DPPD-7104-B.md) of the GeneLab standard pipeline, which includes data visualization outputs
@@ -28,4 +34,4 @@
 
 <br> 
 
-All previous workflow changes were associated with [version A of the GeneLab Amplicon Seq Illumina Pipeline](../../Pipeline_GL-DPPD-7104_Versions/GL-DPPD-7104-A.md), and can be found in the [change log of the SW_AmpIllumina-A workflow](../SW_AmpIllumina-A/CHANGELOG.md).
+All previous workflow changes were associated with [version A of the GeneLab Amplicon Seq Illumina Pipeline](../../Pipeline_GL-DPPD-7104_Versions/GL-DPPD-7104-A.md), and can be found in the [change log of the SW_AmpIllumina-A workflow](../SW_AmpIllumina-A/CHANGELOG.md).