Skip to content

Commit 5e01340

Browse files
committed
fix[typo]: correct name of staged dp_tools plugin
1 parent d5a1cdd commit 5e01340

File tree

1 file changed

+3
-3
lines changed

1 file changed

+3
-3
lines changed

Microarray/Affymetrix/Workflow_Documentation/NF_MAAffymetrix/workflow_code/modules/RUNSHEET_FROM_GLDS.nf

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -8,7 +8,7 @@ process RUNSHEET_FROM_GLDS {
88
input:
99
val(osdAccession)
1010
val(gldsAccession)
11-
path("dp_tools__agilent_1_channel")
11+
path("dp_tools__affymetrix")
1212

1313
output:
1414
path("${ osdAccession }_microarray_v?_runsheet.csv"), emit: runsheet
@@ -19,10 +19,10 @@ process RUNSHEET_FROM_GLDS {
1919
"""
2020
2121
dpt-get-isa-archive --accession ${ osdAccession }
22-
ls dp_tools__agilent_1_channel
22+
ls dp_tools__affymetrix
2323
2424
dpt-isa-to-runsheet --accession ${ osdAccession } \
25-
--plugin-dir dp_tools__agilent_1_channel \
25+
--plugin-dir dp_tools__affymetrix \
2626
--isa-archive *.zip ${ injects }
2727
"""
2828
}

0 commit comments

Comments
 (0)