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lines changed Original file line number Diff line number Diff line change @@ -49,10 +49,10 @@ Bioconductor. Used for:
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- Bacteria: Ensembl bacteria release 59
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- Updated software:
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- tidyverse version updated from 1.3.2 to 2.0.0
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- - STRINGdb version updated from 2.8.4 to 2.16.0
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+ - STRINGdb version updated from 2.8.4 to 2.16.4
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- PANTHER.db version updated from 1.0.11 to 1.0.12
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- rtracklayer version updated from 1.56.1 to 1.64.0
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- - Bioconductor version updated from 3.15.1 to 3.19.1
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+ - Bioconductor version updated from 3.15.1 to 3.19
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- Removed org.EcK12.eg.db and replaced it with a locally created annotations
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database, as it is no longer available on Bioconductor
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- Changed the first argument of GL-DPPD-7110-A_build-genome-annots-tab.R from
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