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lines changed Original file line number Diff line number Diff line change @@ -106,9 +106,9 @@ While in the directory containing the `GL_RefAnnotTable-A_1.1.0` folder that was
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``` bash
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- singularity exec -B $( pwd) /GL_RefAnnotTable-A_1.1.0:/work \
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+ singularity exec --no-home - B $( pwd) /GL_RefAnnotTable-A_1.1.0:$( pwd ) /GL_RefAnnotTable-A_1.1.0 \
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$SINGULARITY_CACHEDIR /quay.io-nasa_genelab-gl-refannottable-a-1.1.0.img \
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- Rscript /work /GL-DPPD-7110-A_build-genome-annots-tab.R ' Mus musculus'
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+ Rscript GL_RefAnnotTable-A_1.1.0 /GL-DPPD-7110-A_build-genome-annots-tab.R ' Mus musculus'
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```
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<br >
@@ -207,9 +207,9 @@ If the reference table does not specify an annotations database for the target o
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#### Using Singularity
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``` bash
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- singularity exec -B $( pwd) /GL_RefAnnotTable-A_1.1.0:/work \
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+ singularity exec --no-home - B $( pwd) /GL_RefAnnotTable-A_1.1.0:$( pwd ) /GL_RefAnnotTable-A_1.1.0 \
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$SINGULARITY_CACHEDIR /quay.io-nasa_genelab-gl-refannottable-a-1.1.0.img \
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- Rscript /work /install-org-db.R ' Bacillus subtilis'
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+ Rscript GL_RefAnnotTable-A_1.1.0 /install-org-db.R ' Bacillus subtilis'
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```
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<br >
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