Increased ANCOMBC's default memory requirement

olabiyi · olabiyi · commit 4a94084e0c41 · 2024-10-29T16:25:31.000-05:00
diff --git a/Amplicon/Illumina/Workflow_Documentation/NF_AmpIllumina-B/workflow_code/nextflow.config b/Amplicon/Illumina/Workflow_Documentation/NF_AmpIllumina-B/workflow_code/nextflow.config
@@ -209,6 +209,7 @@ process {
                   conda = {params.conda.ancombc != null ? params.conda.ancombc : "envs/ancombc.yaml"}
                   container = "quay.io/nasa_genelab/ancombc:2.6.0"
                   cpus = 5
+                  memory = '10 GB'
                   publishDir = [path: "${params.final_outputs_dir}${params.output_prefix}", mode: params.publishDir_mode]
 
            }

Original file line number	Diff line number	Diff line change
`@@ -209,6 +209,7 @@ process {`
`209`	`209`	`conda = {params.conda.ancombc != null ? params.conda.ancombc : "envs/ancombc.yaml"}`
`210`	`210`	`container = "quay.io/nasa_genelab/ancombc:2.6.0"`
`211`	`211`	`cpus = 5`
	`212`	`+ memory = '10 GB'`
`212`	`213`	`publishDir = [path: "${params.final_outputs_dir}${params.output_prefix}", mode: params.publishDir_mode]`
`213`	`214`
`214`	`215`	`}`