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SW_AmpIllumina-B: Add color legend to vis readme
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  • Amplicon/Illumina/Workflow_Documentation/SW_AmpIllumina-B/workflow_code/visualizations

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Amplicon/Illumina/Workflow_Documentation/SW_AmpIllumina-B/workflow_code/visualizations/README.md

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@@ -96,4 +96,5 @@ Additionally, the `RColorBrewer_Palette` variable can be modified in the script.
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* **{output_prefix}PCoA_without_labels{assay_suffix}.png** (principle Coordinates Analysis plot of VST transformed ASV counts, without sample labels)
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* **{output_prefix}normalized_counts{assay_suffix}.tsv** (size factor normalized ASV counts table)
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* **{output_prefix}group1_vs_group2.csv** (differential abundance tables for all pairwise contrasts of groups)
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* **{output_prefix}volcano_group1_vs_group2.png** (volcano plots for all pairwise contrasts of groups)
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* **{output_prefix}volcano_group1_vs_group2.png** (volcano plots for all pairwise contrasts of groups)
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* {output_prefix}color_legend_{assay_suffix}.png (color legend for all groups)

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