#75: fix fancy spectratype

mikessh · mikessh · commit 1779f9ed31c5 · 2017-06-14T08:17:29.000+03:00
diff --git a/src/main/groovy/com/antigenomics/vdjtools/basic/PlotFancySpectratype.groovy b/src/main/groovy/com/antigenomics/vdjtools/basic/PlotFancySpectratype.groovy
@@ -94,6 +94,7 @@ for (int i = 0; i < spectratype.span; i++) {
 topClonotypes.eachWithIndex { it, ind ->
     def bin = spectratype.bin(it)
     spectraMatrix[bin][top - ind] = it.freq
+    spectraMatrix[bin][0] = spectraMatrix[bin][0] - it.freq
 }
 
 def table = "Len\tOther\t" + topClonotypes.reverse().collect { it.cdr3aa }.join("\t")

Original file line number	Diff line number	Diff line change
`@@ -94,6 +94,7 @@ for (int i = 0; i < spectratype.span; i++) {`
`94`	`94`	`topClonotypes.eachWithIndex { it, ind ->`
`95`	`95`	`def bin = spectratype.bin(it)`
`96`	`96`	`spectraMatrix[bin][top - ind] = it.freq`
	`97`	`+ spectraMatrix[bin][0] = spectraMatrix[bin][0] - it.freq`
`97`	`98`	`}`
`98`	`99`
`99`	`100`	`def table = "Len\tOther\t" + topClonotypes.reverse().collect { it.cdr3aa }.join("\t")`