Lint fixes

Author: julianxcarter

src/extractors/BaseCSVExtractor.js

@@ -6,7 +6,7 @@ const logger = require('../helpers/logger');
 
 class BaseCSVExtractor extends Extractor {
   constructor({
-    filePath, url, fileName, dataDirectory, csvSchema, unalterableColumns, csvParse
+    filePath, url, fileName, dataDirectory, csvSchema, unalterableColumns, csvParse,
   }) {
     super();
     this.unalterableColumns = unalterableColumns || [];

src/extractors/CSVAdverseEventExtractor.js

@@ -69,7 +69,9 @@ function formatData(adverseEventData, patientId) {
 }
 
 class CSVAdverseEventExtractor extends BaseCSVExtractor {
-  constructor({ filePath, url, fileName, dataDirectory, csvParse }) {
+  constructor({
+    filePath, url, fileName, dataDirectory, csvParse,
+  }) {
     super({ filePath, url, fileName, dataDirectory, csvParse });
   }
 

src/extractors/CSVCTCAdverseEventExtractor.js

@@ -109,7 +109,9 @@ function formatData(adverseEventData, patientId) {
 }
 
 class CSVCTCAdverseEventExtractor extends BaseCSVExtractor {
-  constructor({ filePath, url, fileName, dataDirectory, csvParse }) {
+  constructor({
+    filePath, url, fileName, dataDirectory, csvParse,
+  }) {
     super({ filePath, url, fileName, dataDirectory, csvParse });
   }
 

src/extractors/CSVCancerDiseaseStatusExtractor.js

@@ -9,7 +9,7 @@ const { CSVCancerDiseaseStatusSchema } = require('../helpers/schemas/csv');
 
 class CSVCancerDiseaseStatusExtractor extends BaseCSVExtractor {
   constructor({
-    filePath, url, fileName, dataDirectory, csvParse, implementation
+    filePath, url, fileName, dataDirectory, csvParse, implementation,
   }) {
     super({ filePath, url, fileName, dataDirectory, csvSchema: CSVCancerDiseaseStatusSchema, csvParse });
     this.implementation = implementation;

src/extractors/CSVCancerRelatedMedicationAdministrationExtractor.js

@@ -46,7 +46,9 @@ function formatData(medicationData, patientId) {
 }
 
 class CSVCancerRelatedMedicationAdministrationExtractor extends BaseCSVExtractor {
-  constructor({ filePath, url, fileName, dataDirectory, csvParse }) {
+  constructor({
+    filePath, url, fileName, dataDirectory, csvParse,
+  }) {
     super({ filePath, url, fileName, dataDirectory, csvParse });
   }
 

src/extractors/CSVCancerRelatedMedicationRequestExtractor.js

@@ -48,7 +48,9 @@ function formatData(medicationData, patientId) {
 }
 
 class CSVCancerRelatedMedicationRequestExtractor extends BaseCSVExtractor {
-  constructor({ filePath, url, fileName, dataDirectory, csvParse }) {
+  constructor({
+    filePath, url, fileName, dataDirectory, csvParse,
+  }) {
     super({ filePath, url, fileName, dataDirectory, csvParse });
   }
 

src/extractors/CSVClinicalTrialInformationExtractor.js

@@ -9,9 +9,9 @@ const { CSVClinicalTrialInformationSchema } = require('../helpers/schemas/csv');
 
 class CSVClinicalTrialInformationExtractor extends BaseCSVExtractor {
   constructor({
-    filePath, url, fileName, dataDirectory, csvParse, clinicalSiteID, clinicalSiteSystem
+    filePath, url, fileName, dataDirectory, csvParse, clinicalSiteID, clinicalSiteSystem,
   }) {
-    super({ filePath, url, fileName, dataDirectory, csvSchema: CSVClinicalTrialInformationSchema });
+    super({ filePath, url, fileName, dataDirectory, csvSchema: CSVClinicalTrialInformationSchema, csvParse });
     if (!clinicalSiteID) logger.warn(`${this.constructor.name} expects a value for clinicalSiteID but got ${clinicalSiteID}`);
     this.clinicalSiteID = clinicalSiteID;
     this.clinicalSiteSystem = clinicalSiteSystem;

src/extractors/CSVConditionExtractor.js

@@ -49,7 +49,9 @@ function formatData(conditionData, patientId) {
 }
 
 class CSVConditionExtractor extends BaseCSVExtractor {
-  constructor({ filePath, url, fileName, dataDirectory, csvParse }) {
+  constructor({
+    filePath, url, fileName, dataDirectory, csvParse,
+  }) {
     super({ filePath, url, fileName, dataDirectory, csvSchema: CSVConditionSchema, csvParse });
   }
 

src/extractors/CSVObservationExtractor.js

@@ -42,7 +42,9 @@ function formatData(observationData, patientId) {
 }
 
 class CSVObservationExtractor extends BaseCSVExtractor {
-  constructor({ filePath, url, fileName, dataDirectory, csvParse }) {
+  constructor({
+    filePath, url, fileName, dataDirectory, csvParse,
+  }) {
     super({ filePath, url, fileName, dataDirectory, csvParse });
   }
 

src/extractors/CSVPatientExtractor.js

@@ -55,7 +55,7 @@ function joinAndReformatData(patientData) {
 
 class CSVPatientExtractor extends BaseCSVExtractor {
   constructor({
-    filePath, url, fileName, dataDirectory, mask = [], csvParse
+    filePath, url, fileName, dataDirectory, mask = [], csvParse,
   }) {
     // Define CSV Columns whose values should never be altered
     const unalterableColumns = ['familyName', 'givenName'];
@@ -66,7 +66,7 @@ class CSVPatientExtractor extends BaseCSVExtractor {
       dataDirectory,
       csvSchema: CSVPatientSchema,
       unalterableColumns,
-      csvParse
+      csvParse,
     });
     this.mask = mask;
   }