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New A. hypogaea genome from Phytozome: https://phytozome-next.jgi.doe.gov/info/AhypogaeaLine8_v1_3 #213

@adf-ncgr

Description

@adf-ncgr

Main steps for adding new genome and annotation collections

Genus/species/collection names:

What are the collection types and names? Example:

  • Arachis/hypogaea/genomes/Line8.gnm1.TBD

  • Arachis/hypogaea/genomes/Line8.gnm1.ann1.TBD

  • Add collection(s) to the Data Store, including commits to datastore-metadata

  • Validate the README(s)

  • Update about_this_collection.yml

  • Calculate AHRD functional annotations

  • Calculate gene family assignments (.gfa)

  • Add to pan-gene set

  • Load relevant mine

  • Add BLAST targets

  • Incorporate into GCV

  • Update the jekyll collections listing

  • Update browser configs

  • run BUSCO

  • Update DSCensor

  • Add LINKOUTS to datastore, refresh linkout service

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