Releases: laminlabs/lamindb
Releases Β· laminlabs/lamindb
0.3.1
What's Changed
- π§ Temporary solution to extend modules by @sunnyosun in #150
Full Changelog: 0.3.0...0.3.1
0.3.0
What's Changed
- ποΈ Separate settings into user vs. instance and one file per instance by @fredericenard in #83
- πΈ Offer manual way of completing a migration by @falexwolf in #86
- β¨ Enable annotating features of dobjects by @sunnyosun in #81
- π Move db API from admin to dev by @falexwolf in #87
- π¨ Use modular schema structure by @falexwolf in #88
- πΌ Upgrade to schema 0.2.1 by @falexwolf in #89
- β¨ Annotate biometa when annotating genes by @sunnyosun in #90
- π₯ Switched logger to use lamin-logger by @sunnyosun in #92
- π Add time out of 6 min to github actions by @Koncopd in #93
- πΈ Let the CLI have actual subcommands by @falexwolf in #96
- π± Adapted to
lndb-schema-biology
0.1.1
by @sunnyosun in #97 - π Move CLI code to
lndb-cli
by @falexwolf in #98 - π Account for table construction in lndb-cli by @falexwolf in #99
- β¬οΈ Upgrade to lndb-cli 0.2.0 by @falexwolf in #101
- π Upgrade
lndb_setup
to 0.3.0 by @falexwolf in #102 - π₯ Moved readout vocab to bioreader by @sunnyosun in #103
- β¨ Enable sharing dobjects & instances in the hub by @fredericenard in #69
- β»οΈ Refactor sharing on the hub by @falexwolf in #104
- π Move out
lndb_hub
by @falexwolf in #105 - β¬οΈ Upgrade to
lndb_schema_core
0.2.0 by @falexwolf in #106 - π Improve
get-started
andcollaborate
tutorials by @falexwolf in #108 - π Re-write landing page by @falexwolf in #109
- π§ Annotate features during ingestion by @sunnyosun in #110
- β¬οΈ Upgrade to
lamindb-schema
0.3.1 by @falexwolf in #111 - π Add a problem statement by @falexwolf in #112
- β¨ Query and update metadata by @sunnyosun in #113
- π©Ή Some fixes of ingesting in-memory dobjects and an analysis draft by @falexwolf in #114
- π¨ Prettified and reordered nbs, renamed
load
toload.entity
by @sunnyosun in #115 - β¬οΈ Upgrade to
lndb_setup
0.4.0 by @falexwolf in #116 - π Prettify user mentions in tutorials & guides by @falexwolf in #117
- β¨ Allow ingesting fcs files and querying genes by @sunnyosun in #118
- π Polish
get-started
&query-data
by @falexwolf in #119 - π Polish the 4 key tutorial pages by @falexwolf in #121
- π Polish the
introspect
tutorial by @falexwolf in #122 - β¬οΈ Upgrade to
lndb_setup
0.4.2 by @falexwolf in #123 - π· Cleaner CI environment switching by @falexwolf in #125
- π Renamed
meta.annotate
todo.link
by @sunnyosun in #126 - β¬οΈ Upgrade to
lndb_schema_core
0.3.0 by @falexwolf in #127 - β¬οΈ Upgrade to lndb_setup 0.5.0 by @falexwolf in #128
- π Migrate
bioreader
tobioreadout
by @sunnyosun in #129 - β¨ New readout_type table, registered species by @sunnyosun in #130
- β‘ Ingest genes properly by @sunnyosun in #131
- π½ Adapt to
lndb-schema-bionty 0.1.4
by @sunnyosun in #134 - π Updated docs by @sunnyosun in #135
- β¨ Integrate bioinformatics pipline runs by @bpenteado in #133
- π Rename schema modules and bioinformatics module by @falexwolf in #136
- β¨ Track storage root location by @fredericenard in #137
- β¬οΈ Upgrade core schema to v0.4.0 by @falexwolf in #138
- β¨ Autogenerate
query
,update
anddelete
functions by @sunnyosun in #139 - π Added logging to update and delete by @sunnyosun in #141
- β¬οΈ Upgrade lndb-hub to v0.5.0 by @fredericenard in #140
- β»οΈ Cleaned up and added a mouse dataset by @sunnyosun in #142
- π Renamed
id
tokey
inupdate
anddelete
APIs by @sunnyosun in #143 - β¬οΈ Upgrade to lnbfx 0.2.0 by @falexwolf in #144
- π Renamed
FeatureModel
toLinkFeatureModel
by @sunnyosun in #145 - Use id to reference storage by @fredericenard in #146
- βοΈ Fixed typo in check versions by @sunnyosun in #147
- ποΈ Make tables within schema modules configurable by @falexwolf in #148
Full Changelog: 0.1.2...0.3.0