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BUG: pval.method disappear when add.all = TRUE on ggsurvplot #673

@Denebium

Description

@Denebium

Hi !
Thanks for this wonderful package.
I noticed that when add.all and pval.method were both on TRUE on the ggsurvplot, the pval.method line is gone. Is there a way to put it back on or to correct the ggsurvplot_add_all() function?

Thanks !

sessioninfo::session_info()
─ Session info ──────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
 setting  value
 version  R version 4.4.2 (2024-10-31)
 os       Ubuntu 22.04.5 LTS
 system   x86_64, linux-gnu
 ui       RStudio
 language (EN)
 collate  C.UTF-8
 ctype    C.UTF-8
 tz       Europe/Paris
 date     2025-02-03
 rstudio  2024.12.0+467 Kousa Dogwood (desktop)
 pandoc   3.4 @ /usr/bin/pandoc

─ Packages ──────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
 package              * version   date (UTC) lib source
 abind                  1.4-8     2024-09-12 [1] CRAN (R 4.4.1)
 annotate               1.82.0    2024-04-30 [1] Bioconductor 3.19 (R 4.4.2)
 AnnotationDbi          1.66.0    2024-05-01 [1] Bioconductor 3.19 (R 4.4.2)
 backports              1.5.0     2024-05-23 [1] CRAN (R 4.4.1)
 beachmat               2.20.0    2024-04-30 [1] Bioconductor 3.19 (R 4.4.1)
 Biobase                2.64.0    2024-04-30 [1] Bioconductor 3.19 (R 4.4.1)
 BiocGenerics           0.50.0    2024-04-30 [1] Bioconductor 3.19 (R 4.4.1)
 BiocParallel           1.38.0    2024-04-30 [1] Bioconductor 3.19 (R 4.4.1)
 BiocSingular           1.20.0    2024-04-30 [1] Bioconductor 3.19 (R 4.4.1)
 Biostrings             2.72.1    2024-06-02 [1] Bioconductor 3.19 (R 4.4.2)
 bit                    4.5.0.1   2024-12-03 [1] CRAN (R 4.4.2)
 bit64                  4.6.0-1   2025-01-16 [1] CRAN (R 4.4.2)
 blob                   1.2.4     2023-03-17 [1] CRAN (R 4.4.1)
 broom                  1.0.7     2024-09-26 [1] CRAN (R 4.4.1)
 cachem                 1.1.0     2024-05-16 [1] CRAN (R 4.4.1)
 car                    3.1-3     2024-09-27 [1] CRAN (R 4.4.1)
 carData                3.0-5     2022-01-06 [1] CRAN (R 4.4.1)
 cellranger             1.1.0     2016-07-27 [1] CRAN (R 4.4.1)
 cli                    3.6.3     2024-06-21 [1] CRAN (R 4.4.1)
 codetools              0.2-19    2023-02-01 [4] CRAN (R 4.2.2)
 colorspace             2.1-1     2024-07-26 [1] CRAN (R 4.4.1)
 commonmark             1.9.2     2024-10-04 [1] CRAN (R 4.4.1)
 crayon                 1.5.3     2024-06-20 [1] CRAN (R 4.4.1)
 data.table             1.16.4    2024-12-06 [1] CRAN (R 4.4.2)
 DBI                    1.2.3     2024-06-02 [1] CRAN (R 4.4.1)
 DelayedArray           0.30.1    2024-05-07 [1] Bioconductor 3.19 (R 4.4.1)
 dplyr                * 1.1.4     2023-11-17 [1] CRAN (R 4.4.1)
 evaluate               1.0.3     2025-01-10 [1] CRAN (R 4.4.2)
 exactRankTests         0.8-35    2022-04-26 [1] CRAN (R 4.4.2)
 farver                 2.1.2     2024-05-13 [1] CRAN (R 4.4.1)
 fastmap                1.2.0     2024-05-15 [1] CRAN (R 4.4.1)
 forcats              * 1.0.0     2023-01-29 [1] CRAN (R 4.4.1)
 Formula                1.2-5     2023-02-24 [1] CRAN (R 4.4.1)
 generics               0.1.3     2022-07-05 [1] CRAN (R 4.4.1)
 GenomeInfoDb           1.40.1    2024-05-24 [1] Bioconductor 3.19 (R 4.4.1)
 GenomeInfoDbData       1.2.12    2024-09-10 [1] Bioconductor
 GenomicRanges          1.56.2    2024-10-09 [1] Bioconductor 3.19 (R 4.4.2)
 ggplot2              * 3.5.1     2024-04-23 [1] CRAN (R 4.4.1)
 ggpubr               * 0.6.0     2023-02-10 [1] CRAN (R 4.4.1)
 ggsci                  3.2.0     2024-06-18 [1] CRAN (R 4.4.1)
 ggsignif               0.6.4     2022-10-13 [1] CRAN (R 4.4.1)
 ggtext                 0.1.2     2022-09-16 [1] CRAN (R 4.4.2)
 glue                   1.8.0     2024-09-30 [1] CRAN (R 4.4.1)
 graph                  1.82.0    2024-04-30 [1] Bioconductor 3.19 (R 4.4.2)
 gridExtra              2.3       2017-09-09 [1] CRAN (R 4.4.1)
 gridtext               0.1.5     2022-09-16 [1] CRAN (R 4.4.2)
 GSEABase               1.66.0    2024-04-30 [1] Bioconductor 3.19 (R 4.4.2)
 GSVA                 * 1.52.3    2024-06-09 [1] Bioconductor 3.19 (R 4.4.2)
 gtable                 0.3.6     2024-10-25 [1] CRAN (R 4.4.2)
 HDF5Array              1.32.1    2024-08-11 [1] Bioconductor 3.19 (R 4.4.1)
 hms                    1.1.3     2023-03-21 [1] CRAN (R 4.4.1)
 httr                   1.4.7     2023-08-15 [1] CRAN (R 4.4.1)
 IRanges                2.38.1    2024-07-03 [1] Bioconductor 3.19 (R 4.4.1)
 irlba                  2.3.5.1   2022-10-03 [1] CRAN (R 4.4.1)
 jsonlite               1.8.9     2024-09-20 [1] CRAN (R 4.4.1)
 KEGGREST               1.44.1    2024-06-19 [1] Bioconductor 3.19 (R 4.4.2)
 km.ci                  0.5-6     2022-04-06 [1] CRAN (R 4.4.2)
 KMsurv                 0.1-5     2012-12-03 [1] CRAN (R 4.4.2)
 knitr                  1.49      2024-11-08 [1] CRAN (R 4.4.2)
 labeling               0.4.3     2023-08-29 [1] CRAN (R 4.4.1)
 lattice                0.22-5    2023-10-24 [4] CRAN (R 4.3.1)
 librarian              1.8.1     2021-07-12 [1] CRAN (R 4.4.2)
 lifecycle              1.0.4     2023-11-07 [1] CRAN (R 4.4.1)
 lubridate            * 1.9.4     2024-12-08 [1] CRAN (R 4.4.2)
 magick                 2.8.5     2024-09-20 [1] CRAN (R 4.4.2)
 magrittr               2.0.3     2022-03-30 [1] CRAN (R 4.4.1)
 markdown               1.13      2024-06-04 [1] CRAN (R 4.4.2)
 Matrix                 1.7-1     2024-10-18 [4] CRAN (R 4.4.1)
 MatrixGenerics         1.16.0    2024-04-30 [1] Bioconductor 3.19 (R 4.4.1)
 matrixStats            1.5.0     2025-01-07 [1] CRAN (R 4.4.2)
 maxstat              * 0.7-25    2017-03-02 [1] CRAN (R 4.4.2)
 memoise                2.0.1     2021-11-26 [1] CRAN (R 4.4.1)
 munsell                0.5.1     2024-04-01 [1] CRAN (R 4.4.1)
 mvtnorm                1.3-3     2025-01-10 [1] CRAN (R 4.4.2)
 pillar                 1.10.1    2025-01-07 [1] CRAN (R 4.4.2)
 pkgconfig              2.0.3     2019-09-22 [1] CRAN (R 4.4.1)
 png                    0.1-8     2022-11-29 [1] CRAN (R 4.4.1)
 purrr                * 1.0.2     2023-08-10 [1] CRAN (R 4.4.1)
 R6                     2.5.1     2021-08-19 [1] CRAN (R 4.4.1)
 Rcpp                   1.0.14    2025-01-12 [1] CRAN (R 4.4.2)
 readr                * 2.1.5     2024-01-10 [1] CRAN (R 4.4.1)
 readxl                 1.4.3     2023-07-06 [1] CRAN (R 4.4.1)
 rhdf5                  2.48.0    2024-04-30 [1] Bioconductor 3.19 (R 4.4.1)
 rhdf5filters           1.16.0    2024-04-30 [1] Bioconductor 3.19 (R 4.4.1)
 Rhdf5lib               1.26.0    2024-04-30 [1] Bioconductor 3.19 (R 4.4.1)
 rjson                  0.2.23    2024-09-16 [1] CRAN (R 4.4.1)
 rlang                  1.1.5     2025-01-17 [1] CRAN (R 4.4.2)
 RSQLite                2.3.9     2024-12-03 [1] CRAN (R 4.4.2)
 rstatix                0.7.2     2023-02-01 [1] CRAN (R 4.4.1)
 rstudioapi             0.17.1    2024-10-22 [1] CRAN (R 4.4.2)
 rsvd                   1.0.5     2021-04-16 [1] CRAN (R 4.4.1)
 S4Arrays               1.4.1     2024-05-20 [1] Bioconductor 3.19 (R 4.4.1)
 S4Vectors              0.42.1    2024-07-03 [1] Bioconductor 3.19 (R 4.4.1)
 ScaledMatrix           1.12.0    2024-04-30 [1] Bioconductor 3.19 (R 4.4.1)
 scales                 1.3.0     2023-11-28 [1] CRAN (R 4.4.1)
 sessioninfo            1.2.2     2021-12-06 [1] CRAN (R 4.4.1)
 SingleCellExperiment   1.26.0    2024-04-30 [1] Bioconductor 3.19 (R 4.4.1)
 SparseArray            1.4.8     2024-05-24 [1] Bioconductor 3.19 (R 4.4.1)
 sparseMatrixStats      1.16.0    2024-04-30 [1] Bioconductor 3.19 (R 4.4.1)
 SpatialExperiment      1.14.0    2024-05-01 [1] Bioconductor 3.19 (R 4.4.2)
 stringi                1.8.4     2024-05-06 [1] CRAN (R 4.4.1)
 stringr              * 1.5.1     2023-11-14 [1] CRAN (R 4.4.1)
 SummarizedExperiment   1.34.0    2024-05-01 [1] Bioconductor 3.19 (R 4.4.1)
 survival             * 3.7-0     2024-06-05 [4] CRAN (R 4.4.0)
 survminer            * 0.5.0     2024-10-30 [1] CRAN (R 4.4.2)
 survMisc               0.5.6     2022-04-07 [1] CRAN (R 4.4.2)
 tibble               * 3.2.1     2023-03-20 [1] CRAN (R 4.4.1)
 tidyr                * 1.3.1     2024-01-24 [1] CRAN (R 4.4.1)
 tidyselect             1.2.1     2024-03-11 [1] CRAN (R 4.4.1)
 tidyverse            * 2.0.0     2023-02-22 [1] CRAN (R 4.4.1)
 timechange             0.3.0     2024-01-18 [1] CRAN (R 4.4.1)
 tzdb                   0.4.0     2023-05-12 [1] CRAN (R 4.4.1)
 UCSC.utils             1.0.0     2024-04-30 [1] Bioconductor 3.19 (R 4.4.1)
 vctrs                  0.6.5     2023-12-01 [1] CRAN (R 4.4.1)
 vroom                  1.6.5     2023-12-05 [1] CRAN (R 4.4.1)
 withr                  3.0.2     2024-10-28 [1] CRAN (R 4.4.2)
 xfun                   0.50      2025-01-07 [1] CRAN (R 4.4.2)
 XML                    3.99-0.18 2025-01-01 [1] CRAN (R 4.4.2)
 xml2                   1.3.6     2023-12-04 [1] CRAN (R 4.4.1)
 xtable                 1.8-4     2019-04-21 [1] CRAN (R 4.4.1)
 XVector                0.44.0    2024-04-30 [1] Bioconductor 3.19 (R 4.4.1)
 zlibbioc               1.50.0    2024-04-30 [1] Bioconductor 3.19 (R 4.4.1)
 zoo                    1.8-12    2023-04-13 [1] CRAN (R 4.4.1)

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