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Have a nice day!
I find out that during process scanning "pe-sieve" as well as "mal_unpack" does a huge amount of disk operations. This is fine when you are inside VM at the physical machine. However, if you are in the sandbox environment which analysis any disk operation it causes a problem.
I did not analyze code, but I think the problem is comparing between mapped image and the original ones. Would it better to have a kind of cache of the most often used libraries? Or at least map library images to avoid disk operations? It might be an option?