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adding link to biorxiv paper
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Here is the list of research articles related to haddock3:
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- **Description of haddock3**: (soon!)
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- **Description of haddock3**: Marco Giulini#, Victor Reys#, Joao M. C. Teixeira#, Brian Jimenez-Garcia#, Rodrigo V. Honorato#, Anna Kravchenko, Xiaotong Xu, Raphaelle Versini, Anna Engel, Stefan Verhoeven, Alexandre M.J.J. Bonvin, [HADDOCK3: A modular and versatile platform for integrative modelling of biomolecular complexes](https://www.biorxiv.org/content/10.1101/2025.04.30.651432v1) [BioRxiv](https://www.biorxiv.org/content/10.1101/2025.04.30.651432v1)
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- **Haddock3 web-application**: (soon!)
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- **Benchmarks**:
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- Focused Antibody-Antigen docking:
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- Glycan docking:
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- Focused Antibody-Antigen docking: M. Giulini, C. Schneider, D. Cutting, N. Desai, C. Deane and **A.M.J.J. Bonvin**. [Towards the accurate modelling of antibody-antigen complexes from sequence using machine learning and information-driven docking](https://doi.org/10.1093/bioinformatics/btae583). _Bioinformatics_ *40*:btae583, p. 1-11 (2024). [BioRxiv](https://www.biorxiv.org/content/10.1101/2023.11.17.567543v1)
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- Glycan docking: A. Ranaudo, M. Giulini, A. Pelissou Ayuso and **A.M.J.J. Bonvin**. [Modelling Protein-Glycan Interactions with HADDOCK](https://doi.org/10.1021/acs.jcim.4c01372). _J. Chem. Inf. Mod._ *64*, 7816–7825 (2024).
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## Citing haddock3 source-code
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