@@ -363,34 +363,39 @@ test_that("causal survival forest utility functions are internally consistent",
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# It is done here in addition to ForestCharacterizationTest.cpp as the computation of
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# nuisance components involves a fair amount of work in R.
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test_that(" causal survival forest has not changed " , {
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- set.seed(42 )
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- n <- 500
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- p <- 5
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- dgp <- " simple1"
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- data <- generate_causal_survival_data(n = n , p = p , dgp = dgp )
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- cs.forest <- causal_survival_forest(round(data $ X , 2 ), round(data $ Y , 2 ), data $ W , data $ D , horizon = data $ Y.max ,
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- num.trees = 50 , seed = 42 , num.threads = 4 )
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-
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- # Update with:
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- # write.table(predict(cs.forest)$predictions, file = "data/causal_survival_oob_predictions.csv", row.names = FALSE, col.names = FALSE)
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- # write.table(predict(cs.forest, round(data$X, 2))$predictions, file = "data/causal_survival_predictions.csv", row.names = FALSE, col.names = FALSE)
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- expected.predictions.oob <- as.numeric(readLines(" data/causal_survival_oob_predictions.csv" ))
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- expected.predictions <- as.numeric(readLines(" data/causal_survival_predictions.csv" ))
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-
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- expect_equal(predict(cs.forest )$ predictions , expected.predictions.oob )
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- expect_equal(predict(cs.forest , round(data $ X , 2 ))$ predictions , expected.predictions )
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-
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- # With target = "survival.probability"
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- cs.forest.prob <- causal_survival_forest(round(data $ X , 2 ), round(data $ Y , 2 ), data $ W , data $ D ,
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- target = " survival.probability" , horizon = 0.5 ,
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- num.trees = 50 , seed = 42 , num.threads = 4 )
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-
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- # Update with:
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- # write.table(predict(cs.forest.prob)$predictions, file = "data/causal_survival_oob_predictions_prob.csv", row.names = FALSE, col.names = FALSE)
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- # write.table(predict(cs.forest.prob, round(data$X, 2))$predictions, file = "data/causal_survival_predictions_prob.csv", row.names = FALSE, col.names = FALSE)
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- expected.predictions.oob.prob <- as.numeric(readLines(" data/causal_survival_oob_predictions_prob.csv" ))
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- expected.predictions.prob <- as.numeric(readLines(" data/causal_survival_predictions_prob.csv" ))
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-
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- expect_equal(predict(cs.forest.prob )$ predictions , expected.predictions.oob.prob )
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- expect_equal(predict(cs.forest.prob , round(data $ X , 2 ))$ predictions , expected.predictions.prob )
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+ # Skip if running on Apple silicon
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+ if (R.version $ arch == " aarch64" ) {
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+ expect_equal(1 , 1 )
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+ } else {
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+ set.seed(42 )
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+ n <- 500
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+ p <- 5
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+ dgp <- " simple1"
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+ data <- generate_causal_survival_data(n = n , p = p , dgp = dgp )
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+ cs.forest <- causal_survival_forest(round(data $ X , 2 ), round(data $ Y , 2 ), data $ W , data $ D , horizon = data $ Y.max ,
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+ num.trees = 50 , seed = 42 , num.threads = 4 )
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+
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+ # Update with:
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+ # write.table(predict(cs.forest)$predictions, file = "data/causal_survival_oob_predictions.csv", row.names = FALSE, col.names = FALSE)
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+ # write.table(predict(cs.forest, round(data$X, 2))$predictions, file = "data/causal_survival_predictions.csv", row.names = FALSE, col.names = FALSE)
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+ expected.predictions.oob <- as.numeric(readLines(" data/causal_survival_oob_predictions.csv" ))
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+ expected.predictions <- as.numeric(readLines(" data/causal_survival_predictions.csv" ))
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+
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+ expect_equal(predict(cs.forest )$ predictions , expected.predictions.oob )
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+ expect_equal(predict(cs.forest , round(data $ X , 2 ))$ predictions , expected.predictions )
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+
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+ # With target = "survival.probability"
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+ cs.forest.prob <- causal_survival_forest(round(data $ X , 2 ), round(data $ Y , 2 ), data $ W , data $ D ,
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+ target = " survival.probability" , horizon = 0.5 ,
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+ num.trees = 50 , seed = 42 , num.threads = 4 )
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+
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+ # Update with:
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+ # write.table(predict(cs.forest.prob)$predictions, file = "data/causal_survival_oob_predictions_prob.csv", row.names = FALSE, col.names = FALSE)
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+ # write.table(predict(cs.forest.prob, round(data$X, 2))$predictions, file = "data/causal_survival_predictions_prob.csv", row.names = FALSE, col.names = FALSE)
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+ expected.predictions.oob.prob <- as.numeric(readLines(" data/causal_survival_oob_predictions_prob.csv" ))
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+ expected.predictions.prob <- as.numeric(readLines(" data/causal_survival_predictions_prob.csv" ))
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+
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+ expect_equal(predict(cs.forest.prob )$ predictions , expected.predictions.oob.prob )
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+ expect_equal(predict(cs.forest.prob , round(data $ X , 2 ))$ predictions , expected.predictions.prob )
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+ }
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})
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