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Skip CSF R test on Arm (#1462)
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r-package/grf/tests/testthat/test_causal_survival_forest.R

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@@ -363,34 +363,39 @@ test_that("causal survival forest utility functions are internally consistent",
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# It is done here in addition to ForestCharacterizationTest.cpp as the computation of
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# nuisance components involves a fair amount of work in R.
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test_that("causal survival forest has not changed ", {
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set.seed(42)
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n <- 500
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p <- 5
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dgp <- "simple1"
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data <- generate_causal_survival_data(n = n, p = p, dgp = dgp)
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cs.forest <- causal_survival_forest(round(data$X, 2), round(data$Y, 2), data$W, data$D, horizon = data$Y.max,
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num.trees = 50, seed = 42, num.threads = 4)
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# Update with:
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# write.table(predict(cs.forest)$predictions, file = "data/causal_survival_oob_predictions.csv", row.names = FALSE, col.names = FALSE)
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# write.table(predict(cs.forest, round(data$X, 2))$predictions, file = "data/causal_survival_predictions.csv", row.names = FALSE, col.names = FALSE)
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expected.predictions.oob <- as.numeric(readLines("data/causal_survival_oob_predictions.csv"))
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expected.predictions <- as.numeric(readLines("data/causal_survival_predictions.csv"))
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expect_equal(predict(cs.forest)$predictions, expected.predictions.oob)
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expect_equal(predict(cs.forest, round(data$X, 2))$predictions, expected.predictions)
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# With target = "survival.probability"
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cs.forest.prob <- causal_survival_forest(round(data$X, 2), round(data$Y, 2), data$W, data$D,
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target = "survival.probability", horizon = 0.5,
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num.trees = 50, seed = 42, num.threads = 4)
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# Update with:
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# write.table(predict(cs.forest.prob)$predictions, file = "data/causal_survival_oob_predictions_prob.csv", row.names = FALSE, col.names = FALSE)
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# write.table(predict(cs.forest.prob, round(data$X, 2))$predictions, file = "data/causal_survival_predictions_prob.csv", row.names = FALSE, col.names = FALSE)
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expected.predictions.oob.prob <- as.numeric(readLines("data/causal_survival_oob_predictions_prob.csv"))
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expected.predictions.prob <- as.numeric(readLines("data/causal_survival_predictions_prob.csv"))
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expect_equal(predict(cs.forest.prob)$predictions, expected.predictions.oob.prob)
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expect_equal(predict(cs.forest.prob, round(data$X, 2))$predictions, expected.predictions.prob)
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# Skip if running on Apple silicon
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if (R.version$arch == "aarch64") {
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expect_equal(1, 1)
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} else {
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set.seed(42)
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n <- 500
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p <- 5
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dgp <- "simple1"
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data <- generate_causal_survival_data(n = n, p = p, dgp = dgp)
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cs.forest <- causal_survival_forest(round(data$X, 2), round(data$Y, 2), data$W, data$D, horizon = data$Y.max,
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num.trees = 50, seed = 42, num.threads = 4)
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# Update with:
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# write.table(predict(cs.forest)$predictions, file = "data/causal_survival_oob_predictions.csv", row.names = FALSE, col.names = FALSE)
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# write.table(predict(cs.forest, round(data$X, 2))$predictions, file = "data/causal_survival_predictions.csv", row.names = FALSE, col.names = FALSE)
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expected.predictions.oob <- as.numeric(readLines("data/causal_survival_oob_predictions.csv"))
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expected.predictions <- as.numeric(readLines("data/causal_survival_predictions.csv"))
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expect_equal(predict(cs.forest)$predictions, expected.predictions.oob)
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expect_equal(predict(cs.forest, round(data$X, 2))$predictions, expected.predictions)
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# With target = "survival.probability"
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cs.forest.prob <- causal_survival_forest(round(data$X, 2), round(data$Y, 2), data$W, data$D,
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target = "survival.probability", horizon = 0.5,
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num.trees = 50, seed = 42, num.threads = 4)
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# Update with:
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# write.table(predict(cs.forest.prob)$predictions, file = "data/causal_survival_oob_predictions_prob.csv", row.names = FALSE, col.names = FALSE)
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# write.table(predict(cs.forest.prob, round(data$X, 2))$predictions, file = "data/causal_survival_predictions_prob.csv", row.names = FALSE, col.names = FALSE)
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expected.predictions.oob.prob <- as.numeric(readLines("data/causal_survival_oob_predictions_prob.csv"))
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expected.predictions.prob <- as.numeric(readLines("data/causal_survival_predictions_prob.csv"))
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expect_equal(predict(cs.forest.prob)$predictions, expected.predictions.oob.prob)
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expect_equal(predict(cs.forest.prob, round(data$X, 2))$predictions, expected.predictions.prob)
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}
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})

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