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Extrapolation notebook typo
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notebooks/extrapolation.ipynb

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"\n",
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"### Positional extrapolation\n",
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"\n",
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"For positional extrapolation, we follow a similar procedure as mutational extrapolation. We designate X% of sequence positions as training and Y% as testing. We divide variants into training, testing, and overlap pools, depending on whether the variants contain mutations only in positions designated as training, only in positions designated as testing, or both in positions designated as training and testing. Finally, we discad the overlap pool, split the training pool into a train and tune set, and use all sequences in the testing pool as the test set\n",
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"For positional extrapolation, we follow a similar procedure as mutational extrapolation. We designate X% of sequence positions as training and Y% as testing. We divide variants into training, testing, and overlap pools, depending on whether the variants contain mutations only in positions designated as training, only in positions designated as testing, or both in positions designated as training and testing. Finally, we discard the overlap pool, split the training pool into a train and tune set, and use all sequences in the testing pool as the test set\n",
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"\n",
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"Functions to generate mutational and positional split are located in `code/split_dataset.py`."
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