model_devi problem #1357

poyi81 · 2023-10-13T13:29:38Z

poyi81
Oct 13, 2023

Dear everyne,
Here are the errors I encountered. The procedure stop in the model_devi step.

Traceback (most recent call last):
File "/dicos_ui_home/litimmy/.local/bin/dpgen", line 8, in
sys.exit(main())
File "/dicos_ui_home/litimmy/.local/lib/python3.9/site-packages/dpgen/main.py", line 233, in main
args.func(args)
File "/dicos_ui_home/litimmy/.local/lib/python3.9/site-packages/dpgen/generator/run.py", line 5109, in gen_run
run_iter(args.PARAM, args.MACHINE)
File "/dicos_ui_home/litimmy/.local/lib/python3.9/site-packages/dpgen/generator/run.py", line 4451, in run_iter
run_model_devi(ii, jdata, mdata)
File "/dicos_ui_home/litimmy/.local/lib/python3.9/site-packages/dpgen/generator/run.py", line 1962, in run_model_devi
run_md_model_devi(iter_index, jdata, mdata)
File "/dicos_ui_home/litimmy/.local/lib/python3.9/site-packages/dpgen/generator/run.py", line 1955, in run_md_model_devi
submission.run_submission()
File "/dicos_ui_home/litimmy/.local/lib/python3.9/site-packages/dpdispatcher/submission.py", line 257, in run_submission
self.handle_unexpected_submission_state()
File "/dicos_ui_home/litimmy/.local/lib/python3.9/site-packages/dpdispatcher/submission.py", line 355, in handle_unexpected_submission_state
raise RuntimeError(
RuntimeError: Meet errors will handle unexpected submission state.
Debug information: remote_root==/ceph/sharedfs/user/litimmy/graduate/run/work/6aff9ea7ea29c67d9d4d620ae77767b75d0a25ee.
Debug information: submission_hash==6aff9ea7ea29c67d9d4d620ae77767b75d0a25ee.
Please check the dirs and scripts in remote_root. The job information mentioned above may help.

And here is the task000.000* in the remote_root.

In some of the task000.000* directories the lammps error is "core dumped".

In some of the task000.000*, it doesn't even start running. Just conf.lmp and input.lammps in there.
In some task000.000*, it just stopped without any errors. For example task.000.000002.

Here is what is inside the task.000.000002. Out of curiosity, I take the input.lammps, conf.lmp and the graph.00*.pb file to my local machine to run normal lammps.
Here is the input.lammps from task.000.000002.

Then this error showed up.

But If I remove the "if "${restart} > 0" then "read_restart dpgen.restart." else ", "if "${restart} == 0" then " and "traj/.". The lammps can run without error.