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If the md simulation is NVT, just explicitly set the |
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Hello, I have files cord.xyz, forces.xyz-1_0.xyz and an output file for each frame, obtained from CP2K. The cord.xyz file mentions the energy of the system. I tried the following for the first frame:
data = dpdata.System()
data.from_xyz('cord.xyz')
This works fine, and I see the data summary. Can I now add the force data to this System? I am also not sure if the energy has been added.
I have also tried fmt='cp2kdata/md' and 'cp2k/output'. But when the output file was read, it showed that 'PRINT_LEVEL MEDIUM' is required, and my output files had 'PRINT_LEVEL LOW', which is why I am now trying with 'from_xyz', to work with this data.
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