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| -# DataJoint Element - Array Electrophysiology Element |
| 1 | +[](http://badge.fury.io/py/element-array-ephys) |
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| -DataJoint Element for extracellular array electrophysiology. DataJoint Elements |
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| -collectively standardize and automate data collection and analysis for neuroscience |
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| -experiments. Each Element is a modular pipeline for data storage and processing with |
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| -corresponding database tables that can be combined with other Elements to assemble a |
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| -fully functional pipeline. |
| 3 | +# DataJoint Element for Extracellular Electrophysiology |
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| - |
| 5 | +DataJoint Element for extracellular array electrophysiology that processes data |
| 6 | +acquired with a polytrode probe |
| 7 | +(e.g. [Neuropixels](https://www.neuropixels.org), Neuralynx) using the |
| 8 | +[SpikeGLX](https://github.com/billkarsh/SpikeGLX) or |
| 9 | +[OpenEphys](https://open-ephys.org/gui) acquisition software and processed with |
| 10 | +[MATLAB-based Kilosort](https://github.com/MouseLand/Kilosort) or [python-based |
| 11 | +Kilosort](https://github.com/MouseLand/pykilosort) spike sorting software. DataJoint |
| 12 | +Elements collectively standardize and automate data collection and analysis for |
| 13 | +neuroscience experiments. Each Element is a modular pipeline for data storage and |
| 14 | +processing with corresponding database tables that can be combined with other Elements |
| 15 | +to assemble a fully functional pipeline. |
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| -Installation and usage instructions can be found at the |
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| -[Element documentation](https://datajoint.com/docs/elements/element-array-ephys). |
| 17 | +## Experiment flowchart |
| 18 | + |
| 19 | + |
| 20 | + |
| 21 | +## Data Pipeline Diagram |
| 22 | + |
| 23 | + |
| 24 | + |
| 25 | + |
| 26 | +## Getting Started |
| 27 | + |
| 28 | ++ Install from PyPI |
| 29 | + |
| 30 | + ```bash |
| 31 | + pip install element-array-ephys |
| 32 | + ``` |
| 33 | + |
| 34 | ++ [Interactive tutorial on GitHub Codespaces](https://github.com/datajoint/workflow-array-ephys#interactive-tutorial) |
| 35 | + |
| 36 | ++ [Documentation](https://datajoint.com/docs/elements/element-array-ephys) |
| 37 | + |
| 38 | +## Support |
| 39 | + |
| 40 | ++ If you need help getting started or run into any errors, please contact our team by email at support@datajoint.com. |
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