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add quality_metrics.ipynb to mkdocs
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docs/mkdocs.yaml

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# ---------------------- PROJECT SPECIFIC ---------------------------
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--- # ---------------------- PROJECT SPECIFIC ---------------------------
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site_name: DataJoint Documentation
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site_url: http://localhost/docs/elements/element-array-ephys
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nav:
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- Element Array Ephys: index.md
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- Concepts: concepts.md
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- Tutorials:
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- Overview: tutorials/index.md
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- Data Download: tutorials/00-data-download-optional.ipynb
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- Configure: tutorials/01-configure.ipynb
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- Workflow Structure: tutorials/02-workflow-structure-optional.ipynb
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- Process: tutorials/03-process.ipynb
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- Automate: tutorials/04-automate-optional.ipynb
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- Explore: tutorials/05-explore.ipynb
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- Drop: tutorials/06-drop-optional.ipynb
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- Downstream Analysis: tutorials/07-downstream-analysis.ipynb
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- Visualizations: tutorials/10-data_visualization.ipynb
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- Electrode Localization: tutorials/08-electrode-localization.ipynb
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- NWB Export: tutorials/09-NWB-export.ipynb
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- Tutorials:
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- Overview: tutorials/index.md
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- Data Download: tutorials/00-data-download-optional.ipynb
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- Configure: tutorials/01-configure.ipynb
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- Workflow Structure: tutorials/02-workflow-structure-optional.ipynb
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- Process: tutorials/03-process.ipynb
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- Automate: tutorials/04-automate-optional.ipynb
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- Explore: tutorials/05-explore.ipynb
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- Drop: tutorials/06-drop-optional.ipynb
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- Downstream Analysis: tutorials/07-downstream-analysis.ipynb
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- Visualizations: tutorials/10-data_visualization.ipynb
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- Electrode Localization: tutorials/08-electrode-localization.ipynb
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- NWB Export: tutorials/09-NWB-export.ipynb
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- Quality Metrics: tutorials/quality_metrics.ipynb
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- Citation: citation.md
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- API: api/ # defer to gen-files + literate-nav
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- Changelog: changelog.md
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# 02. Instead of designating codeblocks with bash, use console. For example..
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# ```console
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# cd ../my_dir
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# ```
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# ```
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# 03. Links across docs should ...
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# A. Not involve line breaks.
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# B. Use relative paths to docs in the same repo
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# 02. Site analytics depend on a local environment variable GOOGLE_ANALYTICS_KEY
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# You can find this in LastPass or declare with any string to suppress errors
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# 03. The API section will pull docstrings.
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# A. Follow google style guide e.g.,
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# A. Follow google style guide e.g.,
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# https://sphinxcontrib-napoleon.readthedocs.io/en/latest/example_google.html
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# With typing suggestions: https://docs.python.org/3/library/typing.html
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# B. To pull a specific workflow fork, change ./docs/src/api/make_pages.py#L19
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# 04. To see your fork of the workflow-{element} in this render, change the
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# URL in ./docs/src/api/make_pages.py#L19 to your fork.
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# 05. For redirecting options For redirect options, see 'redirects' below.
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# 06. To deploy this site on your fork,
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# 06. To deploy this site on your fork,
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# A. declare a branch called gh-pages
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# B. go to the your fork > settings > pages
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# B. go to the your fork > settings > pages
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# C. direct pages to render from the gh-pages branch at root
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# D. push a tag to your fork with the format test*.*.*
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#
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line_length: 88
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- gen-files:
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scripts:
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- ./src/api/make_pages.py
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- ./src/api/make_pages.py
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- literate-nav:
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nav_file: navigation.md
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- exclude-search:
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- pymdownx.inlinehilite
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- pymdownx.snippets
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- footnotes
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extra:
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PATCH_VERSION: !ENV PATCH_VERSION
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generator: false # Disable watermark
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- assets/stylesheets/extra.css
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extra_javascript:
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- https://js-na1.hs-scripts.com/23133402.js # HubSpot chatbot
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- https://js-na1.hs-scripts.com/23133402.js # HubSpot chatbot

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