Merge pull request #194 from ttngu207/dev_spikeinterface_v101

ttngu207 · web-flow · commit 82d73c90493a · 2024-06-05T16:32:12.000-05:00
fix: remove `job_kwargs` for sparsity calculation - memory error in linux container
diff --git a/element_array_ephys/spike_sorting/si_spike_sorting.py b/element_array_ephys/spike_sorting/si_spike_sorting.py
@@ -282,7 +282,6 @@ def _sorting_analyzer_compute():
                 folder=analyzer_output_dir,
                 sparse=True,
                 overwrite=True,
-                **job_kwargs,
             )
 
             # The order of extension computation is drawn from sorting_analyzer.get_computable_extensions()

Original file line number	Diff line number	Diff line change
`@@ -282,7 +282,6 @@ def _sorting_analyzer_compute():`
`282`	`282`	`folder=analyzer_output_dir,`
`283`	`283`	`sparse=True,`
`284`	`284`	`overwrite=True,`
`285`		`- **job_kwargs,`
`286`	`285`	`)`
`287`	`286`
`288`	`287`	`# The order of extension computation is drawn from sorting_analyzer.get_computable_extensions()`