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revert: 🩹 revert to um
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element_array_ephys/probe.py

Lines changed: 6 additions & 6 deletions
Original file line numberDiff line numberDiff line change
@@ -75,8 +75,8 @@ class Electrode(dj.Part):
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shank: int # shank index, starts at 0, advance left to right
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shank_col: int # column index, starts at 0, advance left to right
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shank_row: int # row index, starts at 0.
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x_coord=NULL: float # (μm) x coordinate of the electrode within the probe.
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y_coord=NULL: float # (μm) y coordinate of the electrode within the probe.
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x_coord=NULL: float # (um) x coordinate of the electrode within the probe.
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y_coord=NULL: float # (um) y coordinate of the electrode within the probe.
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"""
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@staticmethod
@@ -220,12 +220,12 @@ def build_electrode_layouts(
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Args:
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site_count_per_shank (int): site count per shank.
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col_spacing (float): (μm) horizontal spacing between sites. Defaults to None (single column).
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row_spacing (float): (μm) vertical spacing between columns. Defaults to None (single row).
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white_spacing (float): (μm) offset spacing. Defaults to None.
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col_spacing (float): (um) horizontal spacing between sites. Defaults to None (single column).
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row_spacing (float): (um) vertical spacing between columns. Defaults to None (single row).
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white_spacing (float): (um) offset spacing. Defaults to None.
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col_count_per_shank (int): number of column per shank. Defaults to 1 (single column).
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shank_count (int): number of shank. Defaults to 1 (single shank).
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shank_spacing (float): (μm) spacing between shanks. Defaults to None (single shank).
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shank_spacing (float): (um) spacing between shanks. Defaults to None (single shank).
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y_origin (str): {"bottom", "top"}. y value decrements if "top". Defaults to "bottom".
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"""
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row_count = int(site_count_per_shank / col_count_per_shank)

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