added overwrite to bedbuncher

khoroshevskyi · khoroshevskyi · commit 40e671061c15 · 2024-04-10T13:45:27.000-04:00
diff --git a/bedboss/bedboss.py b/bedboss/bedboss.py
@@ -312,6 +312,7 @@ def insert_pep(
             upload_pephub=upload_pephub,
             upload_s3=upload_s3,
             no_fail=no_fail,
+            force_overwrite=force_overwrite,
         )
     else:
         _LOGGER.info(
diff --git a/bedboss/bedbuncher/bedbuncher.py b/bedboss/bedbuncher/bedbuncher.py
@@ -161,6 +161,7 @@ def run_bedbuncher(
         plots=plots.model_dump(exclude_none=True, exclude_unset=True),
         local_path=output_folder,
         no_fail=no_fail,
+        overwrite=force_overwrite,
     )
 
 

Original file line number	Diff line number	Diff line change
`@@ -312,6 +312,7 @@ def insert_pep(`
`312`	`312`	`upload_pephub=upload_pephub,`
`313`	`313`	`upload_s3=upload_s3,`
`314`	`314`	`no_fail=no_fail,`
	`315`	`+ force_overwrite=force_overwrite,`
`315`	`316`	`)`
`316`	`317`	`else:`
`317`	`318`	`_LOGGER.info(`
Original file line number	Diff line number	Diff line change
`@@ -161,6 +161,7 @@ def run_bedbuncher(`
`161`	`161`	`plots=plots.model_dump(exclude_none=True, exclude_unset=True),`
`162`	`162`	`local_path=output_folder,`
`163`	`163`	`no_fail=no_fail,`
	`164`	`+ overwrite=force_overwrite,`
`164`	`165`	`)`
`165`	`166`
`166`	`167`