From 69831ded0a685a8d8a95f63b154d3eec5acaf8d2 Mon Sep 17 00:00:00 2001 From: Michelle Khoo Date: Thu, 3 Oct 2024 02:33:14 -0700 Subject: [PATCH 1/2] Increase font size for parasitemia and add arrow --- ulc_mm_package/summary_report/parasitemia_visualization.py | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/ulc_mm_package/summary_report/parasitemia_visualization.py b/ulc_mm_package/summary_report/parasitemia_visualization.py index 995a94395..217cdffa5 100644 --- a/ulc_mm_package/summary_report/parasitemia_visualization.py +++ b/ulc_mm_package/summary_report/parasitemia_visualization.py @@ -118,7 +118,9 @@ def make_parasitemia_plot(parasitemia, err, savefile): ha="center", va="bottom", fontweight="bold", + fontsize=14, ) + ax1.arrow(parasitemia_plot, 10, 0, -3, clip_on=False, head_width=0.025*parasitemia_plot/XLIM[0], head_length=1, length_includes_head=True) ax1.text( bounds_plot[0] * 0.9, 6.5, bounds_raw[0], ha="right", va="bottom", alpha=0.7 ) @@ -155,7 +157,7 @@ def make_parasitemia_plot(parasitemia, err, savefile): ax1.xaxis.set_major_locator(FixedLocator(filtered_major_ticks)) ax1.xaxis.set_minor_locator(FixedLocator(filtered_minor_ticks)) - fig.subplots_adjust(left=0.1, right=0.9, top=0.9, bottom=0.1) + fig.subplots_adjust(left=0.1, right=0.9, top=0.8, bottom=0.1) fig.tight_layout() plt.savefig(savefile) From 919509c822f91588bbb81c583babe75f68fa194f Mon Sep 17 00:00:00 2001 From: Michelle Khoo Date: Thu, 3 Oct 2024 02:34:38 -0700 Subject: [PATCH 2/2] Autoformat --- .../summary_report/parasitemia_visualization.py | 11 ++++++++++- 1 file changed, 10 insertions(+), 1 deletion(-) diff --git a/ulc_mm_package/summary_report/parasitemia_visualization.py b/ulc_mm_package/summary_report/parasitemia_visualization.py index 217cdffa5..d1a529ab1 100644 --- a/ulc_mm_package/summary_report/parasitemia_visualization.py +++ b/ulc_mm_package/summary_report/parasitemia_visualization.py @@ -120,7 +120,16 @@ def make_parasitemia_plot(parasitemia, err, savefile): fontweight="bold", fontsize=14, ) - ax1.arrow(parasitemia_plot, 10, 0, -3, clip_on=False, head_width=0.025*parasitemia_plot/XLIM[0], head_length=1, length_includes_head=True) + ax1.arrow( + parasitemia_plot, + 10, + 0, + -3, + clip_on=False, + head_width=0.025 * parasitemia_plot / XLIM[0], + head_length=1, + length_includes_head=True, + ) ax1.text( bounds_plot[0] * 0.9, 6.5, bounds_raw[0], ha="right", va="bottom", alpha=0.7 )