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Description
code:
library(Seurat)
library(tidydr)
library(schard)
h5ad_path <- 'path2h5ad'
seu_obj<- h5ad2seurat(h5ad_path)
The error lying below:
The error report confuse me like this, is it not recognize the tab space in h5ad?
New object name is X_indexorig_identnCount_RNAnFeature_RNApercent_mtpercent_rpgroupRNA_snn_res_0_2seurat_clusterscelltype1celltype2celltype3celltype4
Warning: Feature names cannot have pipe characters ('|'), replacing with dashes ('-')
Warning: Keys should be one or more alphanumeric characters followed by an underscore, setting key from rna to rna_
Warning: Invalid name supplied, making object name syntactically valid. New object name is X_indexorig_identnCount_RNAnFeature_RNApercent_mtpercent_rpgroupRNA_snn_res_0_2seurat_clusterscelltype1celltype2celltype3celltype4; see ?make.names for more details on syntax validity
Error: Cannot add more or fewer meta.features information without values being named with feature names
Execution halted
Any advice for this issue?
Best,
hanhuihong