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Fix the fasta files
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v03_pipeline/bin/vep-110-GRCh38.sh

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@@ -61,7 +61,7 @@ gcloud storage cat --billing-project $PROJECT gs://seqr-reference-data/vep/110/h
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# gzip -d Homo_sapiens.${ASSEMBLY}.dna.primary_assembly.fa.gz
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# bgzip Homo_sapiens.${ASSEMBLY}.dna.primary_assembly.fa
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# samtools faidx Homo_sapiens.${ASSEMBLY}.dna.primary_assembly.fa.gz
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gcloud storage cp --billing-project $PROJECT 'gs://seqr-reference-data/vep/110/Homo_sapiens.${ASSEMBLY}.dna.primary_assembly.fa.*' /vep_data/ &
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gcloud storage cp --billing-project $PROJECT "gs://seqr-reference-data/vep/110/Homo_sapiens.${ASSEMBLY}.dna.primary_assembly.fa.*" /vep_data/ &
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docker pull ${VEP_DOCKER_IMAGE} &
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wait
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