Try setting force to false

Author: bpblanken

v03_pipeline/lib/tasks/base/base_update_task.py

@@ -13,6 +13,9 @@ def run(self) -> None:
             ht = hl.read_table(self.output().path)
         ht = self.update_table(ht)
         write(ht, self.output().path)
+        # Set force to false after run, allowing "complete()" to succeeded
+        # when dependencies are re-evaluated.
+        self.force = False
 
     def initialize_table(self) -> hl.Table:
         raise NotImplementedError

v03_pipeline/lib/tasks/base/base_write_task.py

@@ -9,6 +9,9 @@ def run(self) -> None:
         self.init_hail()
         ht = self.create_table()
         write(ht, self.output().path)
+        # Set force to false after run, allowing "complete()" to succeeded
+        # when dependencies are re-evaluated.
+        self.force = False
 
     def create_table(self) -> hl.Table:
         raise NotImplementedError