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1 parent b3927c4 commit a3839c6Copy full SHA for a3839c6
v03_pipeline/lib/misc/io.py
@@ -56,7 +56,8 @@ def split_multi_hts(mt: hl.MatrixTable) -> hl.MatrixTable:
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bi = bi.annotate_rows(a_index=1, was_split=False)
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multi = mt.filter_rows(hl.len(mt.alleles) > BIALLELIC)
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split = hl.split_multi_hts(
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- multi, permit_shuffle=mt.count()[1] < MAX_SAMPLES_SPLIT_MULTI_SHUFFLE
+ multi,
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+ permit_shuffle=mt.count()[1] < MAX_SAMPLES_SPLIT_MULTI_SHUFFLE,
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)
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mt = split.union_rows(bi)
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return mt.distinct_by_row()
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