lint

bpblanken · bpblanken · commit 787fcc1508f6 · 2024-09-17T16:57:23.000-04:00
diff --git a/v03_pipeline/lib/model/environment.py b/v03_pipeline/lib/model/environment.py
@@ -10,7 +10,7 @@
     'GRCH38_TO_GRCH37_LIFTOVER_REF_PATH',
     'gs://hail-common/references/grch38_to_grch37.over.chain.gz',
 )
-HAIL_TMP_DIR = os.environ.get('HAIL_TMP_DIR', '/tmp')
+HAIL_TMP_DIR = os.environ.get('HAIL_TMP_DIR', '/tmp')  # noqa: S108
 HAIL_SEARCH_DATA_DIR = os.environ.get('HAIL_SEARCH_DATA_DIR', '/seqr/hail-search-data')
 LOADING_DATASETS_DIR = os.environ.get('LOADING_DATASETS_DIR', '/seqr/seqr-loading-temp')
 PRIVATE_REFERENCE_DATASETS_DIR_DIR = os.environ.get(

Original file line number	Diff line number	Diff line change
`@@ -10,7 +10,7 @@`
`10`	`10`	`'GRCH38_TO_GRCH37_LIFTOVER_REF_PATH',`
`11`	`11`	`'gs://hail-common/references/grch38_to_grch37.over.chain.gz',`
`12`	`12`	`)`
`13`		`-HAIL_TMP_DIR = os.environ.get('HAIL_TMP_DIR', '/tmp')`
	`13`	`+HAIL_TMP_DIR = os.environ.get('HAIL_TMP_DIR', '/tmp') # noqa: S108`
`14`	`14`	`HAIL_SEARCH_DATA_DIR = os.environ.get('HAIL_SEARCH_DATA_DIR', '/seqr/hail-search-data')`
`15`	`15`	`LOADING_DATASETS_DIR = os.environ.get('LOADING_DATASETS_DIR', '/seqr/seqr-loading-temp')`
`16`	`16`	`PRIVATE_REFERENCE_DATASETS_DIR_DIR = os.environ.get(`