Missing reference genome in path

bpblanken · bpblanken · commit 43f173234193 · 2024-09-03T16:48:15.000-04:00
diff --git a/v03_pipeline/lib/vep.py b/v03_pipeline/lib/vep.py
@@ -4,7 +4,7 @@
 
 from v03_pipeline.lib.model import DatasetType, ReferenceGenome
 
-VEP_CONFIG_URI = Template('file:///vep_data/vep-$reference_genome.json')
+VEP_CONFIG_URI = Template('file:///vep_data/$reference_genome/vep-$reference_genome.json')
 
 
 def run_vep(
