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Update 0004_add_gnomad_svs.py
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v03_pipeline/migrations/annotations/0004_add_gnomad_svs.py

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@@ -22,7 +22,7 @@ def migrate(ht: hl.Table, **_) -> hl.Table:
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PHASE_4_CALLSET_WITH_GNOMAD_V4,
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reference_genome=ReferenceGenome.GRCh38.value,
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force_bgz=True
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).annotate_rows(variant_id=mapping_ht.rsid).key_rows_by(mapping_ht.variant_id).rows()
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).key_rows_by('rsid').rows()
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ht = ht.annotate(
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**{
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'info.GNOMAD_V4.1_TRUTH_VID': mapping_ht[ht.key][

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