format

Author: bpblanken

v03_pipeline/lib/tasks/update_lookup_table.py

@@ -95,7 +95,8 @@ def update_table(self, ht: hl.Table) -> hl.Table:
             return ht.annotate_globals(
                 updates=ht.updates.add(
                     hl.Struct(
-                        callset=self.callset_path, project_guid=self.project_guid,
+                        callset=self.callset_path,
+                        project_guid=self.project_guid,
                     ),
                 ),
             )

v03_pipeline/lib/tasks/update_lookup_table_test.py

@@ -20,7 +20,7 @@ def test_skip_update_lookup_table_task(self) -> None:
             dataset_type=DatasetType.SNV_INDEL,
             sample_type=SampleType.WGS,
             callset_path=TEST_VCF,
-            project_guid='R0555_seqr_demo', # a project excluded from the lookup table
+            project_guid='R0555_seqr_demo',  # a project excluded from the lookup table
             project_remap_path=TEST_REMAP,
             project_pedigree_path=TEST_PEDIGREE_3,
             validate=False,
@@ -42,10 +42,7 @@ def test_skip_update_lookup_table_task(self) -> None:
                 ),
             ],
         )
-        self.assertEqual(
-            ht.collect(),
-            []
-        )
+        self.assertEqual(ht.collect(), [])
 
     def test_update_lookup_table_task(self) -> None:
         worker = luigi.worker.Worker()