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1 parent f2ec44e commit 1b97b9fCopy full SHA for 1b97b9f
v03_pipeline/lib/reference_data/clinvar.py
@@ -184,7 +184,8 @@ def download_and_import_clinvar_submission_summary() -> hl.Table:
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urllib.request.urlretrieve(CLINVAR_SUBMISSION_SUMMARY_URL, tmp_file.name) # noqa: S310
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# Unzip the gzipped file first to fix gzip files being read by hail with single partition
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with gzip.open(tmp_file.name, 'rb') as f_in, open(
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- unzipped_tmp_file.name, 'wb',
+ unzipped_tmp_file.name,
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+ 'wb',
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) as f_out:
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shutil.copyfileobj(f_in, f_out)
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