diff --git a/.containerignore b/.containerignore new file mode 100644 index 0000000..aa7c4ba --- /dev/null +++ b/.containerignore @@ -0,0 +1,8 @@ +.[a-z]* +.venv/* +*.sh +*.xml +CHANGELOG.md +Dockerfile +tests/* +tmp/* diff --git a/.github/workflows/checks.yaml b/.github/workflows/checks.yaml index ed60a79..d13007f 100644 --- a/.github/workflows/checks.yaml +++ b/.github/workflows/checks.yaml @@ -12,9 +12,12 @@ jobs: linting: uses: broadinstitute/shared-workflows/.github/workflows/python-lint.yaml@v2.4.0 with: + ruff_version: '0.8.6' use_pylama: false use_ruff: true unit-tests: uses: broadinstitute/shared-workflows/.github/workflows/python-unit-test.yaml@v2.4.0 with: python_package_name: cert_manager + run_coverage: false + test_runner: pytest diff --git a/.green b/.green deleted file mode 100644 index 812f4ac..0000000 --- a/.green +++ /dev/null @@ -1,2 +0,0 @@ -verbose = 3 -run-coverage = True diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index cd13b55..ddede7e 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -1,7 +1,7 @@ --- repos: - repo: https://github.com/pre-commit/pre-commit-hooks - rev: v4.5.0 + rev: v5.0.0 hooks: - id: check-added-large-files - id: check-ast @@ -28,12 +28,12 @@ repos: - id: trailing-whitespace - repo: https://github.com/astral-sh/ruff-pre-commit # Ruff version. - rev: v0.1.14 + rev: v0.8.6 hooks: - id: ruff args: [--fix, --exit-non-zero-on-fix] - repo: https://github.com/adrienverge/yamllint.git - rev: v1.33.0 + rev: v1.35.1 hooks: - id: yamllint args: diff --git a/Containerfile b/Containerfile new file mode 100644 index 0000000..c1ea4f4 --- /dev/null +++ b/Containerfile @@ -0,0 +1,30 @@ +FROM docker.io/node:bookworm AS prettier-install +RUN yarn add prettier@3 + +FROM python:3.11-slim-bookworm + +ARG LOCAL_BIN=/root/.local/bin +ENV PATH=$LOCAL_BIN:$PATH + +# Install prettier +RUN mkdir -p $LOCAL_BIN +COPY --from=prettier-install /usr/local/bin/node $LOCAL_BIN +COPY --from=prettier-install /node_modules/prettier /prettier +RUN ln -s /prettier/bin/prettier.cjs $LOCAL_BIN/prettier + +COPY . /working/ + +WORKDIR /working + +RUN apt-get update \ + && apt-get upgrade -y \ + && apt-get install -yq --no-install-recommends curl make \ + && curl -sSL https://install.python-poetry.org | python3 - \ + && poetry install \ + && rm -rf /tmp/* \ + && rm -rf /var/cache/apt/* \ + && rm -rf /var/tmp/* + +ENTRYPOINT ["poetry", "run"] + +CMD ["bash"] diff --git a/Dockerfile b/Dockerfile deleted file mode 100644 index 598dc81..0000000 --- a/Dockerfile +++ /dev/null @@ -1,20 +0,0 @@ -FROM python:3.11-slim - -COPY poetry.lock pyproject.toml README.md /working/ - -WORKDIR /working - -RUN apt-get update \ - && apt-get upgrade -yq \ - && apt-get install -yq gcc libffi-dev \ - && pip install pip poetry --upgrade \ - && poetry install \ - && rm -f /etc/localtime \ - && ln -s /usr/share/zoneinfo/America/New_York /etc/localtime \ - && rm -rf /tmp/* \ - && rm -rf /var/cache/apt/* \ - && rm -rf /var/tmp/* - -ENTRYPOINT ["poetry", "run"] - -CMD ["bash"] diff --git a/README.md b/README.md index e625aa0..67c7f45 100644 --- a/README.md +++ b/README.md @@ -6,7 +6,7 @@ This library provides a [Python][1] interface to the [Sectigo][2] Certificate Ma ## Basics -`cert_manager` runs on [Python][1] >= 3.7 +`cert_manager` runs on [Python][1] >= 3.9 ## Features @@ -109,15 +109,15 @@ Pull requests to add functionality and fix bugs are always welcome. Please chec ### Testing -We try to have a high level of test coverage on the code. Therefore, when adding anything to the repo, tests should be written to test a new feature or to test a bug fix so that there won't be a regression. This library is setup to be pretty simple to build a working development environment using [Docker][4]. Therefore, it is suggested that you have [Docker][4] installed where you clone this repository to make development easier. +We try to have a high level of test coverage on the code. Therefore, when adding anything to the repo, tests should be written to test a new feature or to test a bug fix so that there won't be a regression. This library is setup to be pretty simple to build a working development environment using [Docker][4]. Therefore, it is suggested that you have [Docker][4] installed where you clone this repository to make development easier. -To start a development environment, you should be able to just run the `dev.sh` script. This script will use the `Dockerfile` in this repository to build a [Docker][4] container with all the dependencies for development installed using [Pipenv][3]. +To start a development environment, you should be able to just run the `dev.bash` script. This script will use the `Containerfile` in this repository to build a [Docker][4] container with all the dependencies for development installed using [Poetry][3]. ```sh -./dev.sh +./dev.bash ``` -The first time you run the script, it should build the [Docker][4] image and then drop you into the container's shell. The directory where you cloned this repository should be volume mounted in to `/usr/src`, which should also be the current working directory. From there, you can make changes as you see fit. Tests can be run from the `/usr/src` directory by simply typing `green` as [green][5] has been setup to with the correct parameters. +The first time you run the script, it should build the [Docker][4] image and then drop you into the container's shell. The directory where you cloned this repository should be volume mounted in to `/working`, which should also be the current working directory. From there, you can make changes as you see fit. Tests can be run from the `/working` directory by simply typing `pytest` as [pytest][5] has been setup to with the correct parameters. ## Changelog @@ -162,7 +162,7 @@ git push --tags [1]: https://www.python.org/ "Python" [2]: https://sectigo.com/ "Sectigo" -[3]: https://pipenv.readthedocs.io/en/latest/ "Pipenv" +[3]: https://python-poetry.org/ "Poetry" [4]: https://www.docker.com/ "Docker" -[5]: https://github.com/CleanCut/green "green" +[5]: https://docs.pytest.org/en/stable/ "pytest" [6]: https://pypi.org/project/bump2version/ "bump2version" diff --git a/dev.bash b/dev.bash new file mode 100755 index 0000000..fca5f43 --- /dev/null +++ b/dev.bash @@ -0,0 +1,89 @@ +#!/usr/bin/env bash + +declare -g CHECKSUM_APP +declare -g CONTAINER_APP +declare -g CONTAINER_IMAGE='cert_manager:dev' +declare -g LABEL_PREFIX='org.broadinstitute.cert-manager' +declare -g SCRIPT_DIR +declare -ga TRACK_FILES=( Containerfile poetry.lock pyproject.toml ) +declare -ga SUDO +declare -ag TTY + +SCRIPT_DIR="$( cd -P "$( dirname "${BASH_SOURCE[0]}" )" && pwd )" + +if hash sha256sum 2>/dev/null; then + CHECKSUM_APP='sha256sum' +elif hash shasum 2>/dev/null; then + CHECKSUM_APP='shasum -a 256' +elif hash md5sum 2>/dev/null; then + CHECKSUM_APP='md5sum' +else + echo 'Could not find a checksumming program. Exiting!' + exit 1 +fi + +if hash docker 2>/dev/null; then + CONTAINER_APP='docker' +elif hash podman 2>/dev/null; then + CONTAINER_APP='podman' +else + echo 'Container environment cannot be found. Exiting!' + exit 2 +fi + +if [[ "${TERM}" != 'dumb' ]]; then + TTY=( -it ) +fi + +if [[ "${CONTAINER_APP}" = 'docker' ]] && [[ "$( uname -s )" != 'Darwin' ]]; then + if [[ ! -w "${DOCKER_SOCKET}" ]]; then + SUDO=( sudo ) + fi +fi + +function build() { + if [[ -z "$1" ]]; then + echo 'Image name not provided to build. Exiting!' + exit 1 + fi + CONTAINER_IMAGE=$1 + + if ! git diff --quiet; then + echo 'Branch is dirty. The build can only happen on an unmodified branch.' + exit 2 + fi + + local -a labels + for tfile in "${TRACK_FILES[@]}"; do + label="$( "${CHECKSUM_APP}" "${tfile}" | awk -v PREFIX="${LABEL_PREFIX}" '{print PREFIX"."$2"="$1}' )" + labels+=( --label "${label}" ) + done + + "${SUDO[@]}" "${CONTAINER_APP}" build --pull -t "${CONTAINER_IMAGE}" "${labels[@]}" . +} + +pushd "${SCRIPT_DIR}" >/dev/null || exit 1 +if ! "${SUDO[@]}" "${CONTAINER_APP}" image ls | awk '{print $1":"$2}' | grep --quiet -E "^(localhost\/)*${CONTAINER_IMAGE}"; then + build "${CONTAINER_IMAGE}" +fi + +rebuild='0' +for tfile in "${TRACK_FILES[@]}"; do + current="$( "${CHECKSUM_APP}" "${tfile}" | cut -d' ' -f1 )" + stored="$( "${CONTAINER_APP}" image inspect --format="{{index .Config.Labels \"${LABEL_PREFIX}.${tfile}\"}}" "${CONTAINER_IMAGE}" )" + + if [[ "${current}" != "${stored}" ]]; then + echo "${tfile} changed. Rebuilding." + rebuild='1' + fi +done + +if [[ "${rebuild}" == '1' ]]; then + build "${CONTAINER_IMAGE}" +fi + +"${SUDO[@]}" "${CONTAINER_APP}" run "${TTY[@]}" --rm \ + -v "${SCRIPT_DIR}:/working" \ + "${CONTAINER_IMAGE}" "$@" + +popd >/dev/null || exit 1 diff --git a/dev.sh b/dev.sh deleted file mode 100755 index 4d065e9..0000000 --- a/dev.sh +++ /dev/null @@ -1,26 +0,0 @@ -#!/bin/bash - -DOCKER_IMAGE='cert_manager:dev' -SUDO= - -SCRIPT_DIR="$( cd -P "$( dirname "${BASH_SOURCE[0]}" )" && pwd )" - -if [ "$TERM" != 'dumb' ] ; then - TTY='-it' -fi - -if [ "$( uname -s )" != 'Darwin' ]; then - if [ ! -w "$DOCKER_SOCKET" ]; then - SUDO='sudo' - fi -fi - -pushd "$SCRIPT_DIR" >/dev/null || exit 1 - -if ! $SUDO docker image ls | awk '{print $1":"$2}' | grep -q "$DOCKER_IMAGE"; then - $SUDO docker build -t "$DOCKER_IMAGE" . -fi - -$SUDO docker run $TTY --rm -v "$SCRIPT_DIR":/working "$DOCKER_IMAGE" "$@" - -popd >/dev/null || exit 1 diff --git a/poetry.lock b/poetry.lock index c8de9b9..f3dc323 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,40 +1,4 @@ -# This file is automatically @generated by Poetry 1.8.3 and should not be changed by hand. - -[[package]] -name = "astroid" -version = "2.11.7" -description = "An abstract syntax tree for Python with inference support." -optional = false -python-versions = ">=3.6.2" -files = [ - {file = "astroid-2.11.7-py3-none-any.whl", hash = "sha256:86b0a340a512c65abf4368b80252754cda17c02cdbbd3f587dddf98112233e7b"}, - {file = "astroid-2.11.7.tar.gz", hash = "sha256:bb24615c77f4837c707669d16907331374ae8a964650a66999da3f5ca68dc946"}, -] - -[package.dependencies] -lazy-object-proxy = ">=1.4.0" -setuptools = ">=20.0" -typed-ast = {version = ">=1.4.0,<2.0", markers = "implementation_name == \"cpython\" and python_version < \"3.8\""} -typing-extensions = {version = ">=3.10", markers = "python_version < \"3.10\""} -wrapt = ">=1.11,<2" - -[[package]] -name = "bleach" -version = "6.0.0" -description = "An easy safelist-based HTML-sanitizing tool." -optional = false -python-versions = ">=3.7" -files = [ - {file = "bleach-6.0.0-py3-none-any.whl", hash = "sha256:33c16e3353dbd13028ab4799a0f89a83f113405c766e9c122df8a06f5b85b3f4"}, - {file = "bleach-6.0.0.tar.gz", hash = "sha256:1a1a85c1595e07d8db14c5f09f09e6433502c51c595970edc090551f0db99414"}, -] - -[package.dependencies] -six = ">=1.9.0" -webencodings = "*" - -[package.extras] -css = ["tinycss2 (>=1.1.0,<1.2)"] +# This file is automatically @generated by Poetry 2.0.0 and should not be changed by hand. [[package]] name = "bump2version" @@ -42,6 +6,7 @@ version = "1.0.1" description = "Version-bump your software with a single command!" optional = false python-versions = ">=3.5" +groups = ["dev"] files = [ {file = "bump2version-1.0.1-py2.py3-none-any.whl", hash = "sha256:37f927ea17cde7ae2d7baf832f8e80ce3777624554a653006c9144f8017fe410"}, {file = "bump2version-1.0.1.tar.gz", hash = "sha256:762cb2bfad61f4ec8e2bdf452c7c267416f8c70dd9ecb1653fd0bbb01fa936e6"}, @@ -49,188 +14,116 @@ files = [ [[package]] name = "certifi" -version = "2024.7.4" +version = "2024.12.14" description = "Python package for providing Mozilla's CA Bundle." optional = false python-versions = ">=3.6" +groups = ["main", "dev"] files = [ - {file = "certifi-2024.7.4-py3-none-any.whl", hash = "sha256:c198e21b1289c2ab85ee4e67bb4b4ef3ead0892059901a8d5b622f24a1101e90"}, - {file = "certifi-2024.7.4.tar.gz", hash = "sha256:5a1e7645bc0ec61a09e26c36f6106dd4cf40c6db3a1fb6352b0244e7fb057c7b"}, -] - -[[package]] -name = "cffi" -version = "1.15.1" -description = "Foreign Function Interface for Python calling C code." -optional = false -python-versions = "*" -files = [ - 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"jaraco.functools", "jaraco.itertools", "more-itertools", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)"] - [metadata] -lock-version = "2.0" -python-versions = "^3.7" -content-hash = "df6b63e8c53471f8ecd665fb400706f8dff3838a2e13f0d2f2dc873a8d68de33" +lock-version = "2.1" +python-versions = ">=3.9,<4.0.0" +content-hash = "93e3c5a8d6eb46cf01004256a70ad1ad4f4a7b0a380ce1161d1acb280dc4f37b" diff --git a/pyproject.toml b/pyproject.toml index 7d3e709..9e70404 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,33 +1,35 @@ -[tool.poetry] -name = "cert_manager" -version = "2.4.0" +[build-system] +requires = ["poetry_core>=1.0.0"] +build-backend = "poetry.core.masonry.api" + +[project] +authors = [ + { name = "Andrew Teixeira", email = ""} +] description = "Python interface to the Sectigo Certificate Manager REST API" +dynamic = [ "dependencies" ] +homepage = "https://github.com/broadinstitute/python-cert_manager.git" +keywords = ["sectigo", "comodo", "certificate"] license = "BSD-3-Clause" -authors = ["Andrew Teixeira "] +name = "cert_manager" readme = "README.md" repository = "https://github.com/broadinstitute/python-cert_manager.git" -homepage = "https://github.com/broadinstitute/python-cert_manager.git" -keywords = ["sectigo", "comodo", "certificate"] +requires-python = ">=3.9,<4.0.0" +version = "2.4.0" [tool.poetry.dependencies] -python = "^3.7" # Compatible python versions must be declared here -requests = "*" -toml = ">=0.9,<0.11" +requests = "^2.32.3" +toml = "^0.10.2" -[tool.poetry.dev-dependencies] -bump2version = "*" -coverage = ">=4.4.2" -fixtures = "*" -green = ">=2.12.0" -mock = ">=2.0.0" -pydocstyle = "<7" -pylint = "*" -pyyaml = "==6.0.1" -responses = "*" -testtools = "*" -twine = "*" -wheel = "*" -yamllint = "*" +[tool.poetry.group.dev.dependencies] +bump2version = "^1.0.1" +coverage = "^7.6.10" +fixtures = "^4.2.2" +mock = "^5.1.0" +responses = "^0.25.3" +testtools = "^2.7.2" +yamllint = "^1.35.1" +pytest = "^8.3.4" [tool.ruff] fixable = ["ALL"] diff --git a/tests/test_acme.py b/tests/test_acme.py index 6a7d7ee..46c906c 100644 --- a/tests/test_acme.py +++ b/tests/test_acme.py @@ -7,6 +7,7 @@ import responses from requests.exceptions import HTTPError +from responses.matchers import json_params_matcher from testtools import TestCase from cert_manager.acme import ACMEAccount, ACMEAccountCreationResponseError @@ -164,8 +165,8 @@ def test_init_param(self): api_url = self.get_api_url(api_version=version) # Setup the mocked response - responses.add(responses.GET, api_url, json=self.valid_response, - status=200, match_querystring=False) + responses.matchers.query_string_matcher = False + responses.add(responses.GET, api_url, json=self.valid_response, status=200) acme = ACMEAccount(client=self.client, api_version=version) data = acme.all(self.org_id) @@ -182,8 +183,8 @@ def test_init_param(self): def test_bad_http(self): """Raise an HTTPError exception if acme accounts cannot be retrieved from the API.""" # Setup the mocked response - responses.add(responses.GET, self.api_url, json=self.error_response, - status=404, match_querystring=False) + responses.matchers.query_string_matcher = False + responses.add(responses.GET, self.api_url, json=self.error_response, status=404) acme = ACMEAccount(client=self.client) self.assertRaises(HTTPError, acme.all, self.org_id) @@ -196,8 +197,8 @@ def test_bad_http(self): def test_cached(self): """Return all the data, but should not query the API twice.""" # Setup the mocked response, refrain from matching the query string - responses.add(responses.GET, self.api_url, json=self.valid_response, - status=200, match_querystring=False) + responses.matchers.query_string_matcher = False + responses.add(responses.GET, self.api_url, json=self.valid_response, status=200) acme = ACMEAccount(client=self.client) acme.all(self.org_id) @@ -215,8 +216,8 @@ def test_cached(self): def test_forced(self): """Return all the data, but should query the API twice.""" # Setup the mocked response, refrain from matching the query string - responses.add(responses.GET, self.api_url, json=self.valid_response, - status=200, match_querystring=False) + responses.matchers.query_string_matcher = False + responses.add(responses.GET, self.api_url, json=self.valid_response, status=200) acme = ACMEAccount(client=self.client) acme.all(self.org_id, force=True) @@ -257,8 +258,9 @@ def generic_test(self): ) ] # Setup the mocked response + responses.matchers.query_string_matcher = False responses.add( - responses.GET, self.api_url, json=valid_response, status=200, match_querystring=False + responses.GET, self.api_url, json=valid_response, status=200, ) acme = ACMEAccount(client=self.client) data = list(acme.find(self.org_id, **params)) @@ -400,7 +402,7 @@ def test_create_success(self, acme_id, response_headers, args, request_params): """Return the created ACME ID.""" # Setup the mocked response responses.add(responses.POST, self.api_url, headers=response_headers, - match=[responses.json_params_matcher(request_params)], + match=[json_params_matcher(request_params)], status=201) acme = ACMEAccount(client=self.client) @@ -414,7 +416,7 @@ def test_create_failure_http_error(self, _, __, args, request_params): """Raise an exception if the ACME Account creation fails with an http error.""" # Setup the mocked response responses.add(responses.POST, self.api_url, json=self.error_response, - match=[responses.json_params_matcher(request_params)], + match=[json_params_matcher(request_params)], status=400) acme = ACMEAccount(client=self.client) @@ -428,7 +430,7 @@ def test_create_failure_http_status_unexpected(self, _, __, args, """Raise an exception if the ACME Account creation fails with unexpected http code.""" # Setup the mocked response responses.add(responses.POST, self.api_url, json=self.error_response, - match=[responses.json_params_matcher(request_params)], + match=[json_params_matcher(request_params)], status=200) # unexpected status acme = ACMEAccount(client=self.client) @@ -444,7 +446,7 @@ def test_create_failure_missing_location_header(self, _, response_headers, # Setup the mocked response responses.add(responses.POST, self.api_url, json=self.error_response, headers=response_headers, - match=[responses.json_params_matcher(request_params)], + match=[json_params_matcher(request_params)], status=201) acme = ACMEAccount(client=self.client) @@ -460,7 +462,7 @@ def test_create_failure_acme_id_not_found(self, _, response_headers, args, # Setup the mocked response responses.add(responses.POST, self.api_url, json=self.error_response, headers=response_headers, - match=[responses.json_params_matcher(request_params)], + match=[json_params_matcher(request_params)], status=201) acme = ACMEAccount(client=self.client) diff --git a/tests/test_client.py b/tests/test_client.py index 7a2b794..2833668 100644 --- a/tests/test_client.py +++ b/tests/test_client.py @@ -326,8 +326,8 @@ def test_params(self): """Add passed parameters.""" # Setup the mocked response json_data = {"some": "data"} - responses.add(responses.GET, self.test_url, json=json_data, status=200, - match_querystring=False) + responses.matchers.query_string_matcher = False + responses.add(responses.GET, self.test_url, json=json_data, status=200) # Call the function with extra parameters params = {"key": "value"}